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  • Society of Chemists and Technologists of Macedonia  (2)
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  • Society of Chemists and Technologists of Macedonia  (2)
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  • 1
    Online Resource
    Online Resource
    Society of Chemists and Technologists of Macedonia ; 2012
    In:  Macedonian Journal of Chemistry and Chemical Engineering Vol. 31, No. 2 ( 2012-12-20), p. 295-
    In: Macedonian Journal of Chemistry and Chemical Engineering, Society of Chemists and Technologists of Macedonia, Vol. 31, No. 2 ( 2012-12-20), p. 295-
    Abstract: Rigid-body Monte Carlo simulations were carried out to study the differential hydration of zwitterionic and neutral forms of glycine in water. To account for the solute polarization by the rather polar liquid environment, initial geometries were chosen as minima on the MP2/aug-cc-pVTZ potential energy surfaces of neutral and zwitterionic glycine continuously solvated by water, implementing the polarizable continuum model (PCM) within the integral equation formalism (IEFPCM). The dynamically changing hydrogen bonding network between the solute and solvent molecules was analyzed imposing distance, energy and angular distribution-based criteria. It was found that, on average, the zwitterionic form of glycine acts as an acceptor of 4.53 hydrogen bonds, while it plays the role of a proton donor in (on average) 2.73 hydrogen bonds with the solvent water molecules. In particular, we have found out that 2.73 solvent water molecules are involved in hydrogen bonding interaction with the ammonium group, acting as proton-acceptors. This is in excellent agreement with the recent experimental neutron diffraction studies, which have indicated that 3.0 water molecules reside in the vicinity of the NH3+ group of aqueous zwitterionic glycine. Neutral form of aqueous glycine, on the other hand, on average donates protons in 1.63 hydrogen bonds with the solvent water molecules, while at the same time it accepts 2.53 hydrogen bonds from the solvent molecules. The greater charge polarization in the zwitterionic form thus makes it much more exposed to hydrogen bonding interaction in polar medium such as water, which is certainly the main reason of the larger stability of this form of glycine in condensed media.
    Type of Medium: Online Resource
    ISSN: 1857-5625 , 1857-5552
    Language: Unknown
    Publisher: Society of Chemists and Technologists of Macedonia
    Publication Date: 2012
    detail.hit.zdb_id: 2412196-4
    Library Location Call Number Volume/Issue/Year Availability
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  • 2
    Online Resource
    Online Resource
    Society of Chemists and Technologists of Macedonia ; 2010
    In:  Macedonian Journal of Chemistry and Chemical Engineering Vol. 29, No. 2 ( 2010-12-15), p. 203-
    In: Macedonian Journal of Chemistry and Chemical Engineering, Society of Chemists and Technologists of Macedonia, Vol. 29, No. 2 ( 2010-12-15), p. 203-
    Abstract: Three numerical methods were applied to compute the anharmonic O–H stretching vibrational frequencies of the free and aqueous hydroxide ion on the basis of one-dimensional vibrational potential energies computed at various levels of theory: i) simple Hamiltonian matrix diagonalization technique, based on representation of the vibrational potential in Simons-Parr-Finlan (SPF) coordinates, ii) Numerov algorithm and iii) Fourier grid Hamiltonian method (FGH).Considering the Numerov algorithm as a reference method, the diagonalization technique performs remarkably well in a very wide range of frequencies and frequency shifts (up to 300 cm–1). FGH method, on the other hand, though showing a very good performance as well, exhibits more significant (and non-uniform) discrepancies with the Numerov algorithm, even for rather modest frequency shifts.
    Type of Medium: Online Resource
    ISSN: 1857-5625 , 1857-5552
    Language: Unknown
    Publisher: Society of Chemists and Technologists of Macedonia
    Publication Date: 2010
    detail.hit.zdb_id: 2412196-4
    Library Location Call Number Volume/Issue/Year Availability
    BibTip Others were also interested in ...
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