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  • Microbiology Society  (7)
  • Biodiversity Research  (7)
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  • Microbiology Society  (7)
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  • Biodiversity Research  (7)
  • 1
    Online Resource
    Online Resource
    Actinoplanes couchii sp. nov.
    Microbiology Society ; 2007
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 57, No. 4 ( 2007-04-01), p. 721-724
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 57, No. 4 ( 2007-04-01), p. 721-724
    Abstract: A Gram-positive bacterium, strain GW8-1761 T , was isolated from soil close to the Marmore waterfalls, Terni, Italy. 16S rRNA gene sequence similarity studies showed that strain GW8-1761 T belonged to the genus Actinoplanes , being most closely related to Actinoplanes italicus JCM 3165 T (98.9 %), A. rectilineatus IFO 13941 T (98.5 %), A. palleronii JCM 7626 T (97.8 %), A. utahensis IFO 13244 T (97.6 %) and A. cyaneus DSM 46137 T (97.6 %). Strain GW8-1761 T could be distinguished from any other Actinoplanes species with validly published names by 16S rRNA gene sequence similarity values of less than 97.5 %. Chemotaxonomic data [major menaquinone MK-9(H 4 ); major polar lipids diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol, with phosphatidylcholine and aminoglycolipids absent; major fatty acids C 15 : 0 , C 16 : 0 , C 16 : 0 iso, C 17 : 1 ω 8 c and summed feature 3 (C 16 : 1 ω 7 c and/or C 15 : 0 iso 2-OH)] supported the affiliation of strain GW8-1761 T to the genus Actinoplanes . The results of DNA–DNA hybridizations and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain GW8-1761 T from the most closely related species. Strain GW8-1761 T therefore merits species status, and we propose the name Actinoplanes couchii sp. nov., with the type strain GW8-1761 T (=DSM 45050 T =CIP 109316 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.64805-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2007
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 2
    Online Resource
    Online Resource
    Nocardia acidivorans sp. nov., isolated from soil of the island of Stromboli
    Microbiology Society ; 2007
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 57, No. 6 ( 2007-06-01), p. 1183-1187
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 57, No. 6 ( 2007-06-01), p. 1183-1187
    Abstract: A Gram-positive, non-spore-forming bacterium (strain GW4-1778 T ) was isolated from soil of the Italian island of Stromboli. 16S rRNA gene sequence similarity studies showed that strain GW4-1778 T is a member of the genus Nocardia , most closely related to Nocardia pseudobrasiliensis (GenBank accession no. DQ659914; 98.6 %), Nocardia nova (Z36930; 98.6 %), Nocardia niigatensis (AB092563; 98.4 %), Nocardia jiangxiensis (AY639902; 98.0 %), Nocardia uniformis (Z46752; 98.0 %) and Nocardia miyunensis (AY639901; 97.8 %). Strain GW4-1778 T could be distinguished from any other established Nocardia species by sequence similarity values of less than 97.5 %. Strain GW4-1778 T exhibited a quinone system with the predominant compound MK-8 (H 4 , ω -cycl) (99.5 %) and traces of MK-8 (H 4 ), characteristic for the genus Nocardia . The polar lipid profile of strain GW4-1778 T consisted of the predominant compound diphosphatidylglycerol, moderate amounts of phosphatidylethanolamine, phosphatidylinositol, two phosphatidylinositol mannosides, a unknown polar lipid and trace amounts of two unknown lipids and the major fatty acids were C 15 : 0 , C 16 : 0 , C 17 : 1 ω 8 c and 10-methyl C 17 : 0 . The results of DNA–DNA hybridizations and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain GW4-1778 T from related species with 16S rRNA gene similarities of 〉 97.5 %. Therefore, strain GW4-1778 T merits species status, for which the name Nocardia acidivorans sp. nov. is proposed, with the type strain GW4-1778 T (=CCUG 53410 T =CIP 109315 T =DSM 45049 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.64813-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2007
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 3
    Online Resource
    Online Resource
    Nonomuraea rosea sp. nov.
    Microbiology Society ; 2010
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 60, No. 5 ( 2010-05-01), p. 1118-1124
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 60, No. 5 ( 2010-05-01), p. 1118-1124
    Abstract: A Gram-positively staining, aerobic, non-motile actinomycete, strain GW 12687 T , that formed rose-pigmented colonies and branched substrate and aerial mycelia was studied in detail for its taxonomic position. On the basis of 16S rRNA gene sequence similarity studies, strain GW 12687 T was grouped into the genus Nonomuraea , being most closely related to Nonomuraea dietziae (97.6 %), Nonomuraea africana (97.1 %), and Nonomuraea kuesteri (97.1 %). The 16S rRNA gene sequence similarity to other species of the genus Nonomuraea was ≤97 %. The chemotaxonomic characterization supported allocation of the strain to the genus Nonomuraea . The major menaquinone was MK-9(H 4 ) with minor amounts of MK-9(H 2 ), MK-9(H 6 ), MK-9(H 0 ) and MK-8(H 4 ). The polar lipid profile contained the major compound diphosphatidylglycerol, moderate amounts of phosphatidylmonomethylethanolamine, phosphatidylethanolamine, hydroxy-phosphatidylethanolamine, hydroxy-phosphatidylmonomethylethanolamine, and an unknown aminophosphoglycolipid. Phosphatidylinositol mannosides and phosphatidylinositol were also present. The major fatty acids were iso- and anteiso- and 10-methyl-branched fatty acids. The results of physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain GW 12687 T from closely related species. Thus, GW 12687 T represents a novel species of the genus Nonomuraea , for which the name Nonomuraea rosea sp. nov. is proposed, with GW 12687 T (=DSM 45177 T =CCUG 56107 T ) as the type strain.
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.014845-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2010
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 4
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    Online Resource
    Nocardia grenadensis sp. nov., isolated from sand of the Caribbean Sea
    Microbiology Society ; 2012
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 62, No. Pt_3 ( 2012-03-01), p. 693-697
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 62, No. Pt_3 ( 2012-03-01), p. 693-697
    Abstract: A Gram-stain-positive, non-spore-forming bacterium (GW5-5797 T ) was isolated on soil extract agar from sand collected at a depth of 5 m in the Caribbean Sea near Grenada. 16S rRNA gene sequence analysis and similarity studies showed that strain GW5-5797 T belongs to the genus Nocardia , and is most closely related to Nocardia speluncae N2-11 T (99.2 % similarity) and Nocardia jinanensis 04-5195 T (99.2 %) and more distantly related to Nocardia rhamnosiphila 202GMO T (98.6 %) and other Nocardia species. Strain GW5-5797 T could be distinguished from all other recognized Nocardia species by sequence similarity values less than 98.5 %. The peptidoglycan diamino acid was meso -diaminopimelic acid. Strain GW5-5797 T exhibited a quinone system with the predominant compounds MK-8(H 4 ω-cyclo) and MK-8(H 2 ). The polar lipid profile of GW5-5797 T consisted of the major compounds diphosphatidylglycerol, phosphatidylethanolamine and an unidentified glycolipid, moderate amounts of phosphatidylinositol and a phosphatidylinositol mannoside and minor amounts of several lipids including a second phosphatidylinositol mannoside. The polyamine pattern contained the major compound spermine and moderate amounts of spermidine. The major fatty acids were C 16 : 0, C 18 : 1 ω9 c and 10-methyl C 18 : 0 . These chemotaxonomic traits are in excellent agreement with those of other Nocardia species. The results of DNA–DNA hybridizations and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain GW5-5797 T from the most closely related species, showing 16S rRNA gene sequence similarities 〉 98.5 %. Strain GW5-5797 T therefore merits separate species status, and we propose the name Nocardia grenadensis sp. nov., with the type strain GW5-5797 T ( = CCUG 60970 T  = CIP 110294 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.030684-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2012
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 5
    Online Resource
    Online Resource
    Nonomuraea kuesteri sp. nov.
    Microbiology Society ; 2005
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 55, No. 2 ( 2005-03-01), p. 847-851
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 55, No. 2 ( 2005-03-01), p. 847-851
    Abstract: A Gram-positive, aerobic, non-motile actinomycete, strain GW 14-1925 T , that formed branched substrate and aerial mycelium was studied using a polyphasic approach. On the basis of 16S rRNA gene sequence similarity studies, strain GW 14-1925 T was shown to belong to the genus Nonomuraea , being most closely related to Nonomuraea longicatena (97·9 %), Nonomuraea turkmeniaca (98·9 %), Nonomuraea helvata (98·6 %), Nonomuraea polychroma (98·5 %), Nonomuraea salmonaea (98·3 %), Nonomuraea roseoviolacea subsp. roseoviolacea (98·1 %) and Nonomuraea roseoviolacea subsp. carminata (97·7 %). The 16S rRNA gene sequence similarity to other Nonomuraea species was 〈 97·5 %. Chemotaxonomic data [major menaquinones of the MK-9 series with minor amounts of MK-8(H 4 ); major polar lipids of phospholipid type IV; fatty acids with major amounts of iso- and anteiso- and 10-methyl-branched fatty acids in combination with iso-branched 2-hydroxy fatty acids] supported allocation of the strain to the genus Nonomuraea . The results of DNA–DNA hybridizations and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain GW 14-1925 T from closely related species; thus, GW 14-1925 T represents a novel species of the genus Nonomuraea , for which the name Nonomuraea kuesteri sp. nov. is proposed, with GW 14-1925 T (=DSM 44753 T =NRRL B-24325 T ) as the type strain.
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.63380-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2005
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 6
    Online Resource
    Online Resource
    Streptosporangium sandarakinum sp. nov.
    Microbiology Society ; 2013
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 63, No. Pt_7 ( 2013-07-01), p. 2484-2489
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 63, No. Pt_7 ( 2013-07-01), p. 2484-2489
    Abstract: A Gram-positive, non-spore-forming bacterium (GW-12028 T ) of unknown origin showing filamentous growth and producing spherical sporangia was studied for its taxonomic allocation. The 16S rRNA gene sequence analysis and subsequent similarity studies showed that strain GW-12028 T belongs to the genus Streptosporangium , and is most closely related to Streptosporangium pseudovulgare DSM 43181 T (99.9 %) and Streptosporangium nondiastaticum DSM 43848 T (99.6 %) and more distantly related to Streptosporangium fragile IFO 14311 T (98.4 %) and other species of the genus Streptosporangium (95.8 to 98 %). Chemotaxonomic analyses showed that the peptidoglycan diamino acid was meso -diaminopimelic acid. Whole-cell hydrolysates contained madurose as the diagnostic sugar and exhibited a quinone system that contained predominantly menaquinones with nine isoprenoic units in the side chain [MK-9, MK-9(H 2 ), MK-9(H 4 )]. The polar lipid profile consisted of diphosphatidylglycerol, phosphatidylglycerol, phoshatidylethanolamine, hydroxyphosphatidylethanolamine, phosphatidylinositol, phosphatidylinositol-mannosides, four unidentified glycolipids, a phospholipid and an aminolipid. The polyamine pattern contained the major compounds spermine and spermidine. The major fatty acids were 10-methyl C 17 : 0 , iso-C 16 : 0 and C 15 : 0 . These chemotaxonomic traits are common to other species of the genus Streptosporangium . DNA–DNA hybridizations and physiological and biochemical tests in comparison with the type strains of the most closely related species, S. nondiastaticum and S. pseudovulgare , allowed genotypic and phenotypic differentiation of strain GW-12028 T . This strain represents a novel species, for which we propose the name Streptosporangium sandarakinum sp. nov., with the type strain GW-12028 T ( = LMG 27062 T  = DSM 45763 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.048504-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2013
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 7
    Online Resource
    Online Resource
    Nocardia tenerifensis sp. nov.
    Microbiology Society ; 2004
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 54, No. 2 ( 2004-03-01), p. 381-383
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 54, No. 2 ( 2004-03-01), p. 381-383
    Abstract: A Gram-positive, non-spore-forming bacterium (GW39-1573 T ) was isolated from soil of the Spanish island of Tenerife. 16S rRNA gene sequence similarity studies showed that strain GW39-1573 T belonged to the genus Nocardia and was most closely related to Nocardia brasiliensis (98·0 %), Nocardia beijingensis (97·3 %), Nocardia transvalensis (97·5 %), Nocardia asteroides (97·2 %) and Nocardia farcinica (97·0 %). Strain GW39-1573 T could be distinguished from all other validly described Nocardia species by sequence similarity values of less than 97 %. Chemotaxonomic data [major menaquinone: MK-8(H 4, ω -cycl ); major polar lipids: diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, phosphatidylinositol mannoside and an unknown glycolipid and an unknown phospholipid; major fatty acids: C 16 : 0 , C 18 : 1 ω 9 c and 10 methyl C 16 : 0 ] and the presence of mycolic acids supported the affiliation of strain GW39-1573 T to the genus Nocardia . The results of DNA–DNA hybridizations and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain GW39-1573 T from those related species that showed 16S rRNA gene sequence similarity values of greater than 97 %. Strain GW39-1573 T merits species status, and the name Nocardia tenerifensis is proposed with the type strain GW39-1573 T (=DSM 44704 T =CIP 107929 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.02841-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2004
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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