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  • 1
    In: Blood, American Society of Hematology, Vol. 114, No. 22 ( 2009-11-20), p. 1933-1933
    Abstract: Abstract 1933 Poster Board I-956 According to the 2008 WHO Classification, mantle cell lymphoma (MCL) most likely derives from neoplastic transformation of a peripheral B cell of the inner mantle zone, mostly of naïve pre-germinal center type. Analysis of the immunoglobulin (IG) repertoire in MCL has revealed a bias in IG heavy variable (IGHV) gene usage and a predominance of unmutated rearrangements, with a variable minor proportion of cases carrying mutated IGHV genes (according to the 98% identity cutoff). However, limited knowledge exists regarding antigen-binding site sequence restrictions or specific somatic hypermutation (SHM) patterns in MCL. We examined the productive IGHV-D-J rearrangements of 651 MCL cases (including 398 cases from the European MCL Network), the largest series to date. We confirm and significantly extend previous observations that the IGHV gene repertoire is remarkably biased, with only three genes accounting for 40.3% of cases (IGHV3-21, 16.7%; IGHV4-34, 15.3%; IGHV1-8: 8.3%). Using bioinformatics approaches previously applied to CLL, biased associations of certain IGHV, IGHD and IGHJ genes with restricted (stereotyped) heavy complementarity-determining regions (HCDR3s) were identified in 68/651 cases (10.4%). Overall, 24 subsets of cases with stereotyped HCDR3s were recognized. Eight of 24 subsets included 3-7 cases each (“confirmed”), while the remaining 16 subsets included two cases each and were considered “provisional”. Stereotyped HCDR3s were found predominantly amongst rearrangements utilizing the IGHV3-21 and IGHV4-34 genes and the IGHJ6 gene. Notably, the MCL HCDR3 stereotypes identified here were distinct from those previously reported in CLL. Based on SHM analysis, the sequences were divided into three groups: (i) truly unmutated (100% germline identity, GI): 189/651 sequences (29.2%); (ii) minimally/borderline mutated (98-99.9% GI): 306/651 sequences (47%); and (iii) mutated ( 〈 98% GI): 155/651 sequences (23.8%), of which 93 had a GI 〈 97%. In keeping with previous reports, the IGHV gene repertoire of the three identity groups differed considerably. For instance, the IGHV3-21 gene was used by 7% of rearrangements with 〈 98% identity vs. 22.8% of rearrangements with 100% identity. In contrast, the IGHV3-23 gene was over-represented among mutated rearrangements (26.4%). Shared (“stereotyped”) amino acid (AA) changes across the entire IGHV gene sequence were identified for certain groups of sequences, especially those utilizing the IGHV1-8, IGHV3-21 and IGHV3-23 genes. A comparison to published series from other entities, in particular CLL, revealed that several stereotyped mutations identified in MCL were “disease-biased”. Importantly, stereotyped AA changes were also observed in the borderline or minimally mutated groups, indicating that even a low level of mutations may be functionally relevant. In conclusion, MCL is characterized by a highly distinctive IG gene repertoire with restricted HCDR3s and very precisely targeted and, probably, functionally driven SHM, strongly implying a role for antigen-driven selection of the clonogenic progenitors. Based on the evidence presented here, an antigen-driven origin of MCL could be envisaged, at least for subsets of cases. Disclosures: No relevant conflicts of interest to declare.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2009
    detail.hit.zdb_id: 1468538-3
    detail.hit.zdb_id: 80069-7
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  • 2
    In: Molecular Medicine, Springer Science and Business Media LLC, Vol. 18, No. 1 ( 2012-01), p. 138-145
    Abstract: The frequent occurrence of stereotyped heavy complementarity-determining region 3 (VH CDR3) sequences among unrelated cases with chronic lymphocytic leukemia (CLL) is widely taken as evidence for antigen selection. Stereotyped VH CDR3 sequences are often defined by the selective association of certain immunoglobulin heavy diversity ( IGHD ) genes in specific reading frames with certain immunoglobulin heavy joining ( IGHJ ) genes. To gain insight into the mechanisms underlying VH CDR3 restrictions and also determine the developmental stage when restrictions in VH CDR3 are imposed, we analyzed partial IGHD-IGHJ rearrangements (D-J) in 829 CLL cases and compared the productively rearranged D-J joints (that is, in-frame junctions without junctional stop codons) to (a) the productive immunoglobulin heavy variable ( IGHV ) -IGHD-IGHJ rearrangements (V-D-J) from the same cases and (b) 174 D-J rearrangements from 160 precursor B-cell acute lymphoblastic leukemia cases (pre-B acute lymphoblastic leukemia (ALL)). Partial D-J rearrangements were detected in 272/829 CLL cases (32.8%). Sequence analysis was feasible in 238 of 272 D-J rearrangements; 198 of 238 (83.2%) were productively rearranged. The D-J joints in CLL did not differ significantly from those in pre-B ALL, except for higher frequency of the IGHD7-27 and IGHJ6 genes in the latter. Among CLL carrying productively rearranged D-J, comparison of the IGHD gene repertoire in productive V-D-J versus D-J revealed the following: (a) overuse of IGHD reading frames encoding hydrophilic peptides among V-D-J and (b) selection of the IGHD3-3 and IGHD6-19 genes in V-D-J junctions. These results document that the IGHD and IGHJ gene biases in the CLL expressed VH CDR3 repertoire are not stochastic but are directed by selection operating at the immunoglobulin protein level.
    Type of Medium: Online Resource
    ISSN: 1076-1551 , 1528-3658
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2012
    detail.hit.zdb_id: 1475577-4
    detail.hit.zdb_id: 1283676-X
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  • 3
    In: Molecular Medicine, Springer Science and Business Media LLC, Vol. 19, No. 1 ( 2013-01), p. 332-332
    Abstract: Eugenia Tsakou, Andreas Agathagelidis, Myriam Boudjoghra, Thorsten Raff, Antonis Dagklis, Maria Chatzouli, Tatjana Smilevska, George Bourikas, Helene Merle-Beral, Eleni Manioudaki-Kavallieratou, Achilles Anagnostopoulos, Monika Bru.ggemann, Frederic Davi, Kostas Stamatopoulos, and Chrysoula Belessi. (2012) Partial versus Productive Immunoglobulin Heavy Locus Rearrangements in Chronic Lymphocytic Leukemia: Implications for B-Cell Receptor Stereotypy. Mol. Med. 2012 Feb 10;18:138–45.
    Type of Medium: Online Resource
    ISSN: 1076-1551 , 1528-3658
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2013
    detail.hit.zdb_id: 1475577-4
    detail.hit.zdb_id: 1283676-X
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  • 4
    In: Blood, American Society of Hematology, Vol. 114, No. 22 ( 2009-11-20), p. 2346-2346
    Abstract: Abstract 2346 Poster Board II-323 A strong sequence-based evidence supporting a role for antigen in the development of CLL is the existence of subsets of patients with stereotyped heavy complementarity-determining region 3 (HCDR3) sequences. Stereotyped HCDR3s are often defined by the selective association of certain IGHD genes in specific reading frames (RF) with certain IGHJ genes, especially IGHJ6. To gain insight into the mechanisms shaping the IG repertoire and also determine the developmental stage when restrictions in HCDR3 are imposed, we investigated the molecular features of incomplete IGHD-IGHJ rearrangements (IDJR) in a series of 830 patients with CLL. IDJRs were detected in 272/830 cases (32.7%). No associations were identified between the occurrence of IDJRs and IGHV gene usage or mutational status in the complete IGHV-D-J rearrangement from the coding IGH allele. A trend for higher IDJR frequency was evident, however, in certain subsets with stereotyped HCDR3s, in particular subset #1 (IGHV1-5-7/IGHD6-19/IGHJ4; 13/33 cases, 40%), #7 (IGHV1-69/IGHD3-3/IGHJ6; 10/21 cases, 48%) and #8 (IGHV4-39/IGHD6-13/IGHJ5; 5/12 cases, 41%). Sequence analysis of the IDJRs revealed: (i) increased frequency of IGHD2 subgroup genes (115/238 cases, 48%), especially IGHD2-2; (ii) equal distribution of the three RFs of the IGHD genes; (iii) increased recombination frequency between 5`genes of the IGHD cluster and 3` genes of the IGHJ cluster, suggestive of secondary rearrangements on the same allele. Overall, 205/238 (86%) IDJRs were considered as potentially functional (PF), since they did not carry a stop codon at the IGHD-J junction. Of note, 26/28 (93%) IDJRs detected in cases from subsets #1, 7 and 8 could be assigned to the PF category. In the group of CLL cases carrying PF IDJRs, comparison of the IGHD gene repertoire in IDJRs vs. complete, expressed IGHV-D-J rearrangements (CE-VDJRs) revealed: (i) statistically significant (p 〈 0.001) selection of the IGHD3-3 and IGHD6-19 genes in RF2 and RF3, respectively, among CE-VDJRs (especially those assigned to subsets #7 and #1, respectively); (ii) preferential usage of RFs encoding for hydrophilic peptides among CE-VDJRs. At a subsequent stage, we compared the repertoire of the IDJRs from the CLL cohort to that of 174 IDJRs obtained from patients with pre-B acute lymphoblastic leukemia (ALL). Except for higher frequency of (i) the IGHD7-27 and IGHJ6 genes and (ii) IGHD-IGHD gene fusions in pre-B ALL, the overall configuration of IDJRs did not differ significantly in CLL vs. pre-B ALL. In conclusion, these results document that the early stages of IG gene rearrangements in pre-B ALL and CLL do not show intrinsic, disease-specific differences. The detailed molecular characterization and comparison of the IGHD and IGHJ gene repertoires in IDJRs vs. CE-VDJRs in CLL provides further support for the notion that CLL development is not stochastic but directed by selection operating at the IG protein level. Disclosures: No relevant conflicts of interest to declare.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2009
    detail.hit.zdb_id: 1468538-3
    detail.hit.zdb_id: 80069-7
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