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High-quality genome assembly of channel catfish, Ictalurus punctatus

Chen, Xiaohui ; Zhong, Liqiang ; Bian, Chao ; [et al.]

Oxford University Press (OUP) ; 2016

In: GigaScience Vol. 5, No. 1 ( 2016-12)

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In: GigaScience, Oxford University Press (OUP), Vol. 5, No. 1 ( 2016-12)

Type of Medium: Online Resource

ISSN: 2047-217X

URL: Article

DOI: 10.1186/s13742-016-0142-5

Language: English

Publisher: Oxford University Press (OUP)

Publication Date: 2016

detail.hit.zdb_id: 2708999-X

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Whole-Genome Sequencing of Chinese Yellow Catfish Provides a Valuable Genetic Resource for High-Throughput Identification of Toxin Genes

Zhang, Shiyong ; Li, Jia ; Qin, Qin ; [et al.]

MDPI AG ; 2018

In: Toxins Vol. 10, No. 12 ( 2018-11-23), p. 488-

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In: Toxins, MDPI AG, Vol. 10, No. 12 ( 2018-11-23), p. 488-

Abstract: Naturally derived toxins from animals are good raw materials for drug development. As a representative venomous teleost, Chinese yellow catfish (Pelteobagrus fulvidraco) can provide valuable resources for studies on toxin genes. Its venom glands are located in the pectoral and dorsal fins. Although with such interesting biologic traits and great value in economy, Chinese yellow catfish is still lacking a sequenced genome. Here, we report a high-quality genome assembly of Chinese yellow catfish using a combination of next-generation Illumina and third-generation PacBio sequencing platforms. The final assembly reached 714 Mb, with a contig N50 of 970 kb and a scaffold N50 of 3.65 Mb, respectively. We also annotated 21,562 protein-coding genes, in which 97.59% were assigned at least one functional annotation. Based on the genome sequence, we analyzed toxin genes in Chinese yellow catfish. Finally, we identified 207 toxin genes and classified them into three major groups. Interestingly, we also expanded a previously reported sex-related region (to ≈6 Mb) in the achieved genome assembly, and localized two important toxin genes within this region. In summary, we assembled a high-quality genome of Chinese yellow catfish and performed high-throughput identification of toxin genes from a genomic view. Therefore, the limited number of toxin sequences in public databases will be remarkably improved once we integrate multi-omics data from more and more sequenced species.

Type of Medium: Online Resource

ISSN: 2072-6651

URL: Article

DOI: 10.3390/toxins10120488

Language: English

Publisher: MDPI AG

Publication Date: 2018

detail.hit.zdb_id: 2518395-3

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Hydrogenation of Phenol to Cyclohexanone over Bifunctional Pd/C-Heteropoly Acid Catalyst in the Liquid Phase

Liu, Shiwei ; Han, Jing ; Wu, Qiong ; [et al.]

Springer Science and Business Media LLC ; 2019

In: Catalysis Letters Vol. 149, No. 9 ( 2019-9), p. 2383-2389

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In: Catalysis Letters, Springer Science and Business Media LLC, Vol. 149, No. 9 ( 2019-9), p. 2383-2389

Type of Medium: Online Resource

ISSN: 1011-372X , 1572-879X

URL: Article

DOI: 10.1007/s10562-019-02852-1

RVK:

VA 2890

Language: English

Publisher: Springer Science and Business Media LLC

Publication Date: 2019

detail.hit.zdb_id: 1501518-X

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Efficacy of the Jingxin Zhidong Formula for Tic Disorders: A Randomized, Double Blind, Double Dummy, Parallel Controlled Trial

Fan, Fei ; Hao, Long ; Zhang, Si ; [et al.]

Informa UK Limited ; 2022

In: Neuropsychiatric Disease and Treatment Vol. Volume 18 ( 2022-01), p. 57-66

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In: Neuropsychiatric Disease and Treatment, Informa UK Limited, Vol. Volume 18 ( 2022-01), p. 57-66

Type of Medium: Online Resource

ISSN: 1178-2021

URL: Article

DOI: 10.2147/NDT.S347432

Language: English

Publisher: Informa UK Limited

Publication Date: 2022

detail.hit.zdb_id: 2180554-4

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Ascl2 Knockdown Results in Tumor Growth Arrest by miRNA-302b-Related Inhibition of Colon Cancer Progenitor Cells

Zhu, Rong ; Yang, Yongtao ; Tian, Yin ; [et al.]

Public Library of Science (PLoS) ; 2012

In: PLoS ONE Vol. 7, No. 2 ( 2012-2-23), p. e32170-

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In: PLoS ONE, Public Library of Science (PLoS), Vol. 7, No. 2 ( 2012-2-23), p. e32170-

Type of Medium: Online Resource

ISSN: 1932-6203

URL: Article

DOI: 10.1371/journal.pone.0032170

DOI: 10.1371/journal.pone.0032170.g001

DOI: 10.1371/journal.pone.0032170.g002

DOI: 10.1371/journal.pone.0032170.g003

DOI: 10.1371/journal.pone.0032170.g004

DOI: 10.1371/journal.pone.0032170.g005

DOI: 10.1371/journal.pone.0032170.g006

DOI: 10.1371/journal.pone.0032170.g007

DOI: 10.1371/journal.pone.0032170.g008

DOI: 10.1371/journal.pone.0032170.s001

DOI: 10.1371/journal.pone.0032170.s002

DOI: 10.1371/journal.pone.0032170.s003

DOI: 10.1371/journal.pone.0032170.s004

DOI: 10.1371/journal.pone.0032170.s005

Language: English

Publisher: Public Library of Science (PLoS)

Publication Date: 2012

detail.hit.zdb_id: 2267670-3

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Molecular mechanism of Guihuang traditional drink in prevention of thrombotic diseases explored through network pharmacology, quantum chemical calculation, and molecular docking-based strategy

GUAN, Tian-Zhu ; BIAN, Can-Feng ; LI, Ning ; [et al.]

Elsevier BV ; 2023

In: Chinese Journal of Analytical Chemistry Vol. 51, No. 2 ( 2023-02), p. 100216-

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In: Chinese Journal of Analytical Chemistry, Elsevier BV, Vol. 51, No. 2 ( 2023-02), p. 100216-

Type of Medium: Online Resource

ISSN: 1872-2040

URL: Article

DOI: 10.1016/j.cjac.2022.100216

Language: English

Publisher: Elsevier BV

Publication Date: 2023

detail.hit.zdb_id: 2399980-9

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Circulating Fibroblast Growth Factor 21 Levels Are Closely Associated with Hepatic Fat Content: A Cross-Sectional Study

Yan, Hongmei ; Xia, Mingfeng ; Chang, Xinxia ; [et al.]

Public Library of Science (PLoS) ; 2011

In: PLoS ONE Vol. 6, No. 9 ( 2011-9-16), p. e24895-

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In: PLoS ONE, Public Library of Science (PLoS), Vol. 6, No. 9 ( 2011-9-16), p. e24895-

Type of Medium: Online Resource

ISSN: 1932-6203

URL: Article

DOI: 10.1371/journal.pone.0024895

DOI: 10.1371/journal.pone.0024895.t001

DOI: 10.1371/journal.pone.0024895.t002

DOI: 10.1371/journal.pone.0024895.t003

DOI: 10.1371/journal.pone.0024895.s001

DOI: 10.1371/journal.pone.0024895.s002

DOI: 10.1371/journal.pone.0024895.s003

Language: English

Publisher: Public Library of Science (PLoS)

Publication Date: 2011

detail.hit.zdb_id: 2267670-3

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Transcriptomic evidence of adaptive tolerance to high environmental ammonia in mudskippers

You, Xinxin ; Chen, Jieming ; Bian, Chao ; [et al.]

Elsevier BV ; 2018

In: Genomics Vol. 110, No. 6 ( 2018-11), p. 404-413

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In: Genomics, Elsevier BV, Vol. 110, No. 6 ( 2018-11), p. 404-413

Type of Medium: Online Resource

ISSN: 0888-7543

URL: Article

DOI: 10.1016/j.ygeno.2018.09.001

RVK:

XA 10000

Language: English

Publisher: Elsevier BV

Publication Date: 2018

detail.hit.zdb_id: 1468023-3

SSG: 12

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GOLPH3 regulates the migration and invasion of glioma cells though RhoA

Zhou, Xiuping ; Zhan, Wenjian ; Bian, Wenbin ; [et al.]

Elsevier BV ; 2013

In: Biochemical and Biophysical Research Communications Vol. 433, No. 3 ( 2013-04), p. 338-344

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In: Biochemical and Biophysical Research Communications, Elsevier BV, Vol. 433, No. 3 ( 2013-04), p. 338-344

Type of Medium: Online Resource

ISSN: 0006-291X

URL: Article

DOI: 10.1016/j.bbrc.2013.03.003

RVK:

WA 15000

Language: English

Publisher: Elsevier BV

Publication Date: 2013

detail.hit.zdb_id: 1461396-7

SSG: 12

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High throughput screening of small immune peptides and antimicrobial peptides from the Fish-T1K database

Yi, Yunhai ; Lv, Yunyun ; You, Xinxin ; [et al.]

Elsevier BV ; 2019

In: Genomics Vol. 111, No. 3 ( 2019-05), p. 215-221

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In: Genomics, Elsevier BV, Vol. 111, No. 3 ( 2019-05), p. 215-221

Type of Medium: Online Resource

ISSN: 0888-7543

URL: Article

DOI: 10.1016/j.ygeno.2018.11.023

RVK:

XA 10000

Language: English

Publisher: Elsevier BV

Publication Date: 2019

detail.hit.zdb_id: 1468023-3

SSG: 12

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