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Supplementary material 4 from: Gladstone NS, Niemiller ML, Pieper EB, Dooley KE, McKinney ML (2019) Morphometrics and phylogeography of the cave-obligate land snail Helicodiscus barri (Gastropoda, Stylommatophora, Helicodiscidae). Subterranean Biology 30: 1-32. https://doi.org/10.3897/subtbiol.30.35321

Gladstone, Nicholas S. ; Niemiller, Matthew L. ; Pieper, Evelyn B. ; [et al.]

Pensoft Publishers ; 2019

In: Subterranean Biology Vol. 30 ( 2019-05-29), p. 1-32

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In: Subterranean Biology, Pensoft Publishers, Vol. 30 ( 2019-05-29), p. 1-32

Abstract: Molecular studies have recently led to the detection of many cryptic species complexes within morphologically ambiguous species formerly undescribed by the scientific community. Organisms such as land snails are at a particularly higher risk of species misidentification and misinterpretation, in that gastropod systematics are based almost entirely on external shell morphology. Subterranean ecosystems are associated with especially high degrees of cryptic speciation, largely owing to the abiotic similarities of these systems. In this study, we attempt to diagnose the potential cryptic diversity in the troglobitic land snail Helicodiscusbarri . Land snails are generally associated with having low vagility, and as such this species’ broad, mosaic distribution indicates the misdiagnosis of this organism as a single species. We analyze both mitochondrial (16S, CO1) and nuclear (28S, H3) genetic data for 23 populations. Phylogeny for H.barri was reconstructed using both maximum-likelihood and Bayesian approaches to assess relationships among populations, and two species delimitation methods (mPTP and ABGD) were used to detect the presence of unique molecular operational taxonomic units (MOTUs). Species delimitation results revealed seven and sixteen MOTUs respectively, suggesting the presence of several cryptic lineages within H.barri . To assess how external shell morphology corresponds with patterns of genetic and environmental variation, two morphometric approaches were used incorporating 115 shells from 31 populations. Both morphometric approaches reveal a significant environmental influence on shell morphology, and one approach showed the significance of MOTU groups. We discuss the delimitation and morphometric results and additionally provide discussion on the taxonomic and conservation implications of this study.

Type of Medium: Online Resource

ISSN: 1314-2615 , 1768-1448

URL: Article

DOI: 10.3897/subtbiol.30.35321

DOI: 10.3897/subtbiol.30.35321.figure1

DOI: 10.3897/subtbiol.30.35321.figure2

DOI: 10.3897/subtbiol.30.35321.figure3

DOI: 10.3897/subtbiol.30.35321.figure4

DOI: 10.3897/subtbiol.30.35321.figure5

DOI: 10.3897/subtbiol.30.35321.figure6

DOI: 10.3897/subtbiol.30.35321.figure7

DOI: 10.3897/subtbiol.30.35321.suppl1

DOI: 10.3897/subtbiol.30.35321.suppl2

DOI: 10.3897/subtbiol.30.35321.suppl3

DOI: 10.3897/subtbiol.30.35321.suppl4

Language: Unknown

Publisher: Pensoft Publishers

Publication Date: 2019

detail.hit.zdb_id: 2633922-5

SSG: 12

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Supplementary material 1 from: Gladstone NS, Perez KE, Pieper EB, Carter ET, Dooley KE, Shoobs NF, Engel AS, Niemiller ML (2019) A new species of stygobitic snail in the genus Antrorbis Hershler & Thompson, 1990 (Gastropoda, Cochliopidae) from the Appalachian Valley and Ridge of eastern Tennessee, USA. ZooKeys 898: 103-120. https://doi.org/10.3897/zookeys.898.46917

Gladstone, Nicholas S. ; Perez, Kathryn E. ; Pieper, Evelyn B. ; [et al.]

Pensoft Publishers ; 2019

In: ZooKeys Vol. 898 ( 2019-12-10), p. 103-120

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In: ZooKeys, Pensoft Publishers, Vol. 898 ( 2019-12-10), p. 103-120

Abstract: A new species of cave snail (Littorinimorpha: Cochliopidae) in the genus Antrorbis is described from the dark zone of two caves in the Appalachian Valley and Ridge province in eastern Tennessee, United States. The Tennessee Cavesnail, Antrorbis tennesseensis Perez, Shoobs, Gladstone, & amp; Niemiller, sp. nov. is distinguished from its only known congener, Antrorbis breweri , by the absence of raised tubercles on its finely spirally striate protoconch, and its unique radular formula. Moreover, A. tennesseensis is genetically distinct from A. breweri based on substantial divergence at the mitochondrial CO1 locus. This is the first cavesnail to be described from the Appalachian Valley and Ridge (AVR) physiographic province in the state of Tennessee, which previously represented a substantial gap in the distribution of stygobitic (i.e., aquatic, subterranean-obligate) gastropods.

Type of Medium: Online Resource

ISSN: 1313-2970 , 1313-2989

URL: Article

DOI: 10.3897/zookeys.898.46917

DOI: 10.3897/zookeys.898.46917.figure1

DOI: 10.3897/zookeys.898.46917.figure2

DOI: 10.3897/zookeys.898.46917.figure3

DOI: 10.3897/zookeys.898.46917.figure4

DOI: 10.3897/zookeys.898.46917.figure5

DOI: 10.3897/zookeys.898.46917.suppl1

Language: Unknown

Publisher: Pensoft Publishers

Publication Date: 2019

detail.hit.zdb_id: 2445640-8

SSG: 12

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Irish Society of Gastroenterology : Proceedings of Winter Meeting held November, 1994 in Dublin

Neelamakam, P. K. ; Brazil, E. ; Attwood, S. ; [et al.]

Springer Science and Business Media LLC ; 1995

In: Irish Journal of Medical Science Vol. 164, No. 2 ( 1995-4), p. 175-190

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In: Irish Journal of Medical Science, Springer Science and Business Media LLC, Vol. 164, No. 2 ( 1995-4), p. 175-190

Type of Medium: Online Resource

ISSN: 0021-1265 , 1863-4362

URL: Article

DOI: 10.1007/BF02973290

Language: English

Publisher: Springer Science and Business Media LLC

Publication Date: 1995

detail.hit.zdb_id: 2275855-0

detail.hit.zdb_id: 2468506-9

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Xpert MTB/RIF Ultra for the Diagnosis of Tuberculous Meningitis: A Small Step Forward

Donovan, Joseph ; Cresswell, Fiona V ; Thuong, Nguyen Thuy Thuong ; [et al.]

Oxford University Press (OUP) ; 2020

In: Clinical Infectious Diseases Vol. 71, No. 8 ( 2020-11-05), p. 2002-2005

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In: Clinical Infectious Diseases, Oxford University Press (OUP), Vol. 71, No. 8 ( 2020-11-05), p. 2002-2005

Abstract: The delayed diagnosis of tuberculous meningitis (TBM) leads to poor outcomes, yet the current diagnostic methods for identifying Mycobacterium tuberculosis in cerebrospinal fluid (CSF) are inadequate. The first comparative study of the new GeneXpert MTB/RIF Ultra (Xpert Ultra) for TBM diagnosis suggested increased sensitivity of Xpert Ultra. Two subsequent studies have shown Xpert Ultra has improved sensitivity, but has insufficient negative predictive value to exclude TBM. Collecting and processing large volumes of CSF for mycobacterial testing are important for optimal diagnostic test performance. But clinical, radiological, and laboratory parameters remain essential for TBM diagnosis and empiric therapy is often needed. We therefore caution against the use of Xpert Ultra as a single diagnostic test for TBM; it cannot be used to “rule out” TBM.

Type of Medium: Online Resource

ISSN: 1058-4838 , 1537-6591

URL: Article

DOI: 10.1093/cid/ciaa473

RVK:

XA 10000

Language: English

Publisher: Oxford University Press (OUP)

Publication Date: 2020

detail.hit.zdb_id: 2002229-3

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Supplemental Information 2: Mammut americanum tooth measurements.

Dooley, Alton C. ; Scott, Eric ; Green, Jeremy ; [et al.]

PeerJ ; 2019

In: PeerJ Vol. 7 ( 2019-03-27), p. e6614-

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In: PeerJ, PeerJ, Vol. 7 ( 2019-03-27), p. e6614-

Abstract: A new species of mastodon from the Pleistocene of western North America, Mammut pacificus sp. nov. is herein recognized, with specimens identified throughout California and from two localities in southern Idaho. This new taxon differs from the contemporaneous M. americanum in having narrower teeth, most prominently in M3/m3, as well as six sacral vertebrae, femur with a proportionally greater mid-shaft diameter, and no mandibular tusks at any growth stage. All known Pleistocene Mammut remains from California are consistent with our diagnosis of M. pacificus , which indicates that M. americanum was not present in California.

Type of Medium: Online Resource

ISSN: 2167-8359

URL: Article

DOI: 10.7717/peerj.6614

DOI: 10.7717/peerj.6614/fig-1

DOI: 10.7717/peerj.6614/fig-2

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DOI: 10.7717/peerj.6614/fig-14

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DOI: 10.7717/peerj.6614/fig-18

DOI: 10.7717/peerj.6614/fig-19

DOI: 10.7717/peerj.6614/fig-20

DOI: 10.7717/peerj.6614/fig-21

DOI: 10.7717/peerj.6614/fig-22

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DOI: 10.7717/peerj.6614/fig-26

DOI: 10.7717/peerj.6614/fig-27

DOI: 10.7717/peerj.6614/fig-28

DOI: 10.7717/peerj.6614/fig-29

DOI: 10.7717/peerj.6614/fig-30

DOI: 10.7717/peerj.6614/fig-31

DOI: 10.7717/peerj.6614/fig-32

DOI: 10.7717/peerj.6614/fig-33

DOI: 10.7717/peerj.6614/table-1

DOI: 10.7717/peerj.6614/table-2

DOI: 10.7717/peerj.6614/table-3

DOI: 10.7717/peerj.6614/table-4

DOI: 10.7717/peerj.6614/table-5

DOI: 10.7717/peerj.6614/table-6

DOI: 10.7717/peerj.6614/table-7

DOI: 10.7717/peerj.6614/table-8

DOI: 10.7717/peerj.6614/table-9

DOI: 10.7717/peerj.6614/table-10

DOI: 10.7717/peerj.6614/table-11

DOI: 10.7717/peerj.6614/table-12

DOI: 10.7717/peerj.6614/table-13

DOI: 10.7717/peerj.6614/table-14

DOI: 10.7717/peerj.6614/table-15

DOI: 10.7717/peerj.6614/table-16

DOI: 10.7717/peerj.6614/supp-1

DOI: 10.7717/peerj.6614/supp-2

Language: English

Publisher: PeerJ

Publication Date: 2019

detail.hit.zdb_id: 2703241-3

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Multi-messenger Observations of a Binary Neutron Star Merger

Abbott, B. P. ; Abbott, R. ; Abbott, T. D. ; [et al.]

American Astronomical Society ; 2017

In: The Astrophysical Journal Vol. 848, No. 2 ( 2017-10-16), p. L12-

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In: The Astrophysical Journal, American Astronomical Society, Vol. 848, No. 2 ( 2017-10-16), p. L12-

Type of Medium: Online Resource

ISSN: 2041-8213

URL: Article

DOI: 10.3847/2041-8213/aa91c9

Language: Unknown

Publisher: American Astronomical Society

Publication Date: 2017

detail.hit.zdb_id: 2207648-7

detail.hit.zdb_id: 2006858-X

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Open Data from the Third Observing Run of LIGO, Virgo, KAGRA, and GEO

Abbott, R. ; Abe, H. ; Acernese, F. ; [et al.]

American Astronomical Society ; 2023

In: The Astrophysical Journal Supplement Series Vol. 267, No. 2 ( 2023-08-01), p. 29-

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In: The Astrophysical Journal Supplement Series, American Astronomical Society, Vol. 267, No. 2 ( 2023-08-01), p. 29-

Abstract: The global network of gravitational-wave observatories now includes five detectors, namely LIGO Hanford, LIGO Livingston, Virgo, KAGRA, and GEO 600. These detectors collected data during their third observing run, O3, composed of three phases: O3a starting in 2019 April and lasting six months, O3b starting in 2019 November and lasting five months, and O3GK starting in 2020 April and lasting two weeks. In this paper we describe these data and various other science products that can be freely accessed through the Gravitational Wave Open Science Center at https://gwosc.org . The main data set, consisting of the gravitational-wave strain time series that contains the astrophysical signals, is released together with supporting data useful for their analysis and documentation, tutorials, as well as analysis software packages.

Type of Medium: Online Resource

ISSN: 0067-0049 , 1538-4365

URL: Article

DOI: 10.3847/1538-4365/acdc9f

RVK:

UA 1000

Language: Unknown

Publisher: American Astronomical Society

Publication Date: 2023

detail.hit.zdb_id: 2006860-8

detail.hit.zdb_id: 2207650-5

SSG: 16,12

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Search for High-energy Neutrinos from Binary Neutron Star Merger GW170817 with ANTARES, IceCube, and the Pierre Auger Observatory

Albert, A. ; André, M. ; Anghinolfi, M. ; [et al.]

American Astronomical Society ; 2017

In: The Astrophysical Journal Vol. 850, No. 2 ( 2017-11-30), p. L35-

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In: The Astrophysical Journal, American Astronomical Society, Vol. 850, No. 2 ( 2017-11-30), p. L35-

Type of Medium: Online Resource

ISSN: 2041-8213

URL: Article

DOI: 10.3847/2041-8213/aa9aed

Language: Unknown

Publisher: American Astronomical Society

Publication Date: 2017

detail.hit.zdb_id: 2207648-7

detail.hit.zdb_id: 2006858-X

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Search for intermediate-mass black hole binaries in the third observing run of Advanced LIGO and Advanced Virgo

Abbott, R. ; Abbott, T. D. ; Acernese, F. ; [et al.]

EDP Sciences ; 2022

In: Astronomy & Astrophysics Vol. 659 ( 2022-03), p. A84-

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In: Astronomy & Astrophysics, EDP Sciences, Vol. 659 ( 2022-03), p. A84-

Abstract: Intermediate-mass black holes (IMBHs) span the approximate mass range 100−10 5 M ⊙ , between black holes (BHs) that formed by stellar collapse and the supermassive BHs at the centers of galaxies. Mergers of IMBH binaries are the most energetic gravitational-wave sources accessible by the terrestrial detector network. Searches of the first two observing runs of Advanced LIGO and Advanced Virgo did not yield any significant IMBH binary signals. In the third observing run (O3), the increased network sensitivity enabled the detection of GW190521, a signal consistent with a binary merger of mass ∼150 M ⊙ providing direct evidence of IMBH formation. Here, we report on a dedicated search of O3 data for further IMBH binary mergers, combining both modeled (matched filter) and model-independent search methods. We find some marginal candidates, but none are sufficiently significant to indicate detection of further IMBH mergers. We quantify the sensitivity of the individual search methods and of the combined search using a suite of IMBH binary signals obtained via numerical relativity, including the effects of spins misaligned with the binary orbital axis, and present the resulting upper limits on astrophysical merger rates. Our most stringent limit is for equal mass and aligned spin BH binary of total mass 200 M ⊙ and effective aligned spin 0.8 at 0.056 Gpc −3 yr −1 (90% confidence), a factor of 3.5 more constraining than previous LIGO-Virgo limits. We also update the estimated rate of mergers similar to GW190521 to 0.08 Gpc −3 yr −1 .

Type of Medium: Online Resource

ISSN: 0004-6361 , 1432-0746

URL: Article

DOI: 10.1051/0004-6361/202141452

RVK:

UA 1000

RVK:

US 1090

Language: English

Publisher: EDP Sciences

Publication Date: 2022

detail.hit.zdb_id: 1458466-9

SSG: 16,12

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Population of Merging Compact Binaries Inferred Using Gravitational Waves through GWTC-3

Abbott, R. ; Abbott, T. D. ; Acernese, F. ; [et al.]

American Physical Society (APS) ; 2023

In: Physical Review X Vol. 13, No. 1 ( 2023-3-29)

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In: Physical Review X, American Physical Society (APS), Vol. 13, No. 1 ( 2023-3-29)

Type of Medium: Online Resource

ISSN: 2160-3308

URL: Article

DOI: 10.1103/PhysRevX.13.011048

Language: English

Publisher: American Physical Society (APS)

Publication Date: 2023

detail.hit.zdb_id: 2622565-7

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