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  • 1
    In: Functional Plant Biology, CSIRO Publishing, Vol. 46, No. 1 ( 2019), p. 93-
    Abstract: Iron (Fe) is a fundamental element involved in various plant metabolic processes. However, when Fe uptake is excessive, it becomes toxic to the plant and disrupts cellular homeostasis. The aim of this study was to determine the physiological and biochemical mechanisms underlying tolerance to Fe toxicity in contrasting rice varieties adapted to African environments. Four varieties (CK801 and Suakoko 8 (tolerant), Supa and IR64 (sensitive)) selected from our previous work were analysed in more detail, and the first part of this study reports morphological, physiological and biochemical responses induced by Fe toxicity in these four varieties. Morphological (shoot length, root length, number of lateral roots), physiological (photosynthesis rate, stomatal conductance, transpiration rate, fluorescence, relative water content and cell membrane stability) and biochemical (tissue Fe, chlorophyll pigments, soluble sugars, protein and starch) traits were measured, as appropriate, on both shoot and root tissues and at different time points during the stress period. Fe toxicity significantly (P≤0.05) reduced growth and metabolism of all the four varieties. Tolerant varieties showed more lateral roots than the sensitive ones, under Fe toxic conditions as well as higher photosynthesis rate, chlorophyll content and cell membrane stability. Strong dilution of Fe concentration in cells was identified, as one of the additional tolerance mechanisms used by CK801, whereas Suakoko 8 mainly used strong mobilisation of carbohydrates at the early stage of the stress period to anticipate metabolite shortage. Traits associated with Fe toxicity tolerance in this study could be specifically targeted in trait-based breeding programs of superior lowland rice varieties tolerant of Fe toxicity.
    Type of Medium: Online Resource
    ISSN: 1445-4408
    Language: English
    Publisher: CSIRO Publishing
    Publication Date: 2019
    SSG: 12
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  • 2
    In: Functional Plant Biology, CSIRO Publishing, Vol. 46, No. 11 ( 2019), p. 1009-
    Abstract: Drought and low P availability are major limitations for rainfed rice (Oryza spp.) production. Root anatomy plays a key role in resource acquisition and tolerance to P and water limitations. Root anatomical responses of three contrasting rice varieties to combinations of different levels of P (deficient to non-limiting) and water availability (water stress to submergence) were evaluated in two pot trials. P availability was the dominant growth-limiting factor, but anatomical root responses to water availability were more prominent than responses to P availability. Cortical cell file number and number of xylem vessels decreased as a response to water stress, but stele and xylem diameter increased. Low P availability induced thinner xylem vessels and a thinner stele. Drought tolerance related to an overall thicker root stele, thicker xylem vessels and a larger water conductance. Some root traits were observed to be more responsive to water and P availability, whereas other traits were more robust to these environmental factors but highly determined by variety. The observed genotypic variation in root anatomy provides opportunities for trait-based breeding. The plasticity of several traits to multiple environmental factors highlights the need for strategic trait selection or breeding adapted to specific target environments.
    Type of Medium: Online Resource
    ISSN: 1445-4408
    Language: English
    Publisher: CSIRO Publishing
    Publication Date: 2019
    SSG: 12
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  • 3
    Online Resource
    Online Resource
    Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria (INIA) ; 2015
    In:  Spanish Journal of Agricultural Research Vol. 13, No. 2 ( 2015-05-29), p. e0701-
    In: Spanish Journal of Agricultural Research, Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria (INIA), Vol. 13, No. 2 ( 2015-05-29), p. e0701-
    Abstract: 〈 p 〉 New Rice(s) for Africa (NERICA) are high yielding rice varieties mostly cultivated in Sub-Saharan Africa and developed by the Africa Rice Center. This study is aimed at investigating the proportion of introgression of parental genomic contribution of 60 lowland NERICA varieties and establishment of molecular profiling. Agro-morphological data from 17 characteristics was recorded and significant ( 〈 em 〉 p 〈 /em 〉 & lt;0.05) to high significant ( 〈 em 〉 p 〈 /em 〉 & lt;0.0001) differences were obtained with leaf length and width, plant height at maturity, days to heading, maturity, primary and secondary branching of panicles, and grain width and grain thickness. A total of 114 microsatellite polymorphic markers covering 2183.13 cM of the rice genome showed the proportions of alleles introgressed from the donor parent ( 〈 em 〉 Oryza glaberrima 〈 /em 〉 ) into 52 lowland NERICA lines (TOG5681 and IR64) 〈 em 〉 〈 /em 〉 as follows: 11% for BC 〈 sub 〉 2 〈 /sub 〉 , 6.07% for BC 〈 sub 〉 3, 〈 /sub 〉 and 7.55% for BC 〈 sub 〉 4 〈 /sub 〉 . The introgression proportions for the eight remaining lowland NERICA lines derived from other crosses ranged from 5.5 to 11.3%. The proportion recorded with the recurrent parent was 83.99%. The highest introgression proportions of the 〈 em 〉 O. glaberrima 〈 /em 〉 allele for all 60 lowland NERICA lines were found on chromosomes 2, 6 and 12 (TOG5681/IR64) and on chromosome 3 with NERIC-L-29 (TOG5681/IR1529-680-3-2). Multivariate analyses performed using an association of agro-morphological and molecular data revealed two major groups according to the distribution of the lowland NERICAs including the lowland NERICAs released were found in cluster 1 of the dendrogram. Genetic and genomic studies, QTL identification and analysis using agro-morphologically significant traits revealed should be used to develop mega-varieties adapted in rice growth conditions in Sub-Saharan Africa. 〈 /p 〉
    Type of Medium: Online Resource
    ISSN: 2171-9292 , 1695-971X
    Language: Unknown
    Publisher: Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria (INIA)
    Publication Date: 2015
    detail.hit.zdb_id: 2172833-1
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  • 4
    Online Resource
    Online Resource
    GSC Online Press ; 2022
    In:  World Journal of Advanced Research and Reviews Vol. 13, No. 1 ( 2022-01-30), p. 038-046
    In: World Journal of Advanced Research and Reviews, GSC Online Press, Vol. 13, No. 1 ( 2022-01-30), p. 038-046
    Abstract: Rice (Oryza sativa L.) is a staple food crop in many countries in Africa. Africa consumes 11.6 million tons of rice per annum and out of 39 rice-producing countries, 21 import 50% to 99% of their rice requirements. The inability to reach the yield potential that would sustain Africa’s need for rice is due to many biotic and abiotic constraints that rice production faces. In lowland grown rice, one of the abiotic factors hindering rice production is iron toxicity. Excess uptake of ferrous (Fe2+) ions leads to a physiological stress, which results, into poor production. The current study aimed at selection of varieties tolerant to iron toxicity and assessment of the genetic diversity linked to this trait. In a hydroponic experiment conducted in a screen house at Africa Rice Centre in Dar es Salaam, 32 rice varieties were evaluated for tolerance to iron toxicity. The experiment was laid out in a split plot design with iron concentration as the main plot factor and variety as the sub plot factor. Two levels of iron concentration were used: 2 ppm and 300 ppm of Fe2+ as control and test concentrations, respectively. Traits observed to gauge tolerance were leaf bronzing (an indicator of iron toxicity), plant height, tillering, number of leaves, shoot weight (above ground), root length and root weight. The varieties ARICA8, and CK801 were found to be tolerant due to low bronzing indices, higher shoot weight, more number of leaves and lack of significant variation in morphology between the two Fe treatments except for the plant height. Correlation analysis depicted negative correlation between leaf bronzing and the other traits measured especially shoot biomass.
    Type of Medium: Online Resource
    ISSN: 2581-9615
    URL: Issue
    Language: Unknown
    Publisher: GSC Online Press
    Publication Date: 2022
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  • 5
    In: Journal of Experimental Botany, Oxford University Press (OUP), Vol. 71, No. 14 ( 2020-07-06), p. 4188-4200
    Abstract: Adoption of rice varieties that perform well under high iron-associated (HIA) stress environments can enhance rice production in West Africa. This study reports the genetic characterization of 323 rice accessions and breeding lines cultivated in West Africa using genotyping-by-sequencing and their phenotypic response to HIA treatments in hydroponic solution (1500 mg l−1 FeSO4·7H2O) and hot-spot fields. The germplasm consisted of four genetic subpopulations: Oryza glaberrima (14%), O. sativa-japonica (7%), O. sativa-indica Group 1 (45%), and O. sativa-indica Group 2 (25%). Severe versus mild stress in the field was associated with a reduced SPAD value (12%), biomass (56%), and grain yield (57%), with leaf bronzing explaining 30% and 21% of the variation for biomass and grain yield, respectively. Association mapping using 175 indica genotypes identified 23 significant single nucleotide polymorphism (SNP) markers that mapped to 14 genomic regions. Genome-wide association study (GWAS) signals associated with leaf bronzing, a routinely used indicator of HIA stress, differed in hydroponic compared with field conditions. Contrastingly, six significant SNPs on chromosomes 8 and 9 were associated with the SPAD value under HIA stress in both field and hydroponic experiments, and a candidate potassium transporter gene mapped under the peak on chromosome 8. This study helps define criteria for assessing rice performance under HIA environments.
    Type of Medium: Online Resource
    ISSN: 0022-0957 , 1460-2431
    RVK:
    Language: English
    Publisher: Oxford University Press (OUP)
    Publication Date: 2020
    detail.hit.zdb_id: 1466717-4
    SSG: 12
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  • 6
    In: Functional Plant Biology, CSIRO Publishing, Vol. 47, No. 2 ( 2020), p. 145-
    Abstract: To enhance breeding efficiency for iron (Fe) toxicity tolerance and boost lowland rice production in sub-Saharan Africa, we have characterised the morphological, physiological and biochemical responses of contrasting rice varieties to excess iron. Here, we report the capacity of four varieties (CK801 and Suakoko8 (tolerant), Supa and IR64 (sensitive)) to oxidise iron in the rhizosphere and control iron-induced oxidative stress. The experiments were conducted in hydroponic conditions using modified Magnavaca nutrient solution and 300 ppm of ferrous iron (Fe2+) supplied in the form of FeSO4. Severe oxidative stress was observed in sensitive varieties as revealed by their high levels of lipid peroxidation. Histochemical and biochemical analyses showed that tolerant varieties exhibited a better development of the aerenchyma and greater oxygen release than the sensitive varieties in response to excess Fe. Both suberin and lignin deposits were observed in the root, stem and leaf tissues but with varying intensities depending on the variety. Under iron toxic conditions, tolerant varieties displayed increased superoxide dismutase (SOD), glutathione reductase (GR), peroxidase (POX) and ascorbate peroxidase (APX) activities in both the roots and shoots, whereas sensitive varieties showed increased APX and catalase (CAT) activities in the roots. This study had revealed also that Suakoko8 mainly uses root oxidation to exclude Fe2+ from its rhizosphere, and CK801 possesses a strong reactive oxygen species scavenging system, in addition to root oxidation ability. Key traits associated with these tolerance mechanisms such as a well-developed aerenchyma, radial oxygen loss restricted to the root cap as well as strong activation of antioxidative enzymes (SOD, GR, POX and APX) could be useful selection criteria in rice varietal improvement programs for enhanced Fe toxicity tolerance.
    Type of Medium: Online Resource
    ISSN: 1445-4408
    Language: English
    Publisher: CSIRO Publishing
    Publication Date: 2020
    SSG: 12
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  • 7
    In: Frontiers in Plant Science, Frontiers Media SA, Vol. 7 ( 2016-09-27)
    Type of Medium: Online Resource
    ISSN: 1664-462X
    Language: Unknown
    Publisher: Frontiers Media SA
    Publication Date: 2016
    detail.hit.zdb_id: 2687947-5
    detail.hit.zdb_id: 2613694-6
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