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Supplementary material 1 from: Casarin N, Hasbroucq S, López-Mercadal J, Miranda MÁ, Bragard C, Grégoire J-C (2023) Measuring the threat from a distance: insight into the complexity and perspectives for implementing sentinel plantation to test the host range of Xylella fastidiosa. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 47-80. https://doi.org/10.3897/neobiota.84.90024

Casarin, Noemi ; Hasbroucq, Séverine ; López-Mercadal, Júlia ; [et al.]

Pensoft Publishers ; 2023

In: NeoBiota Vol. 84 ( 2023-05-18), p. 47-80

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In: NeoBiota, Pensoft Publishers, Vol. 84 ( 2023-05-18), p. 47-80

Abstract: The sentinel plantation concept consists of assessing the impact of exotic factors, such as pests and pathogens, on plants of interest by planting them out of their native range. This tool is a way to enhance knowledge for pest risk analysis (PRA) by guiding decisions on how quarantine organisms should be regulated and where to focus prevention and surveillance efforts for an early detection. In this study, the sentinel method was used in the case of research on Xylella fastidiosa , a plant pathogenic bacterium that has recently been found established in southern Europe, but whose potential impact and possible host range are still poorly documented in northern areas where the bacterium is not known to occur. To improve knowledge on the susceptibility of potential hosts of X. fastidiosa in northern Europe, a sentinel plantation of Prunus domestica cv. Opal, Quercus petraea and Salix alba was established in the X. fastidiosa -infected area of Majorca. In order to assess the circulation of the bacterium in the sentinel plot and around it, surveys of the local flora and insect vectors were carried out, as well as the planting of a network of rosemary “spy plants”. Symptomatic monitoring and molecular analyses were performed on the sentinel plants for four years. During these years, X. fastidiosa was never detected in our sentinel plants most likely because of the low infectivity pressure recorded in the surroundings. This study underlines the complexity of conducting sentinel plantation assays combined with X. fastidiosa research, highlighting the need for long-term investigation and questioning the efficiency of the sentinel tool. However, this study is placed in perspective with other valuable sentinel plantations. It also highlights the complementarity of the tool and proposes elements to improve or re-orientate the implementation of future sentinel projects.

Type of Medium: Online Resource

ISSN: 1314-2488 , 1619-0033

URL: Article

DOI: 10.3897/neobiota.84.90024

DOI: 10.3897/neobiota.84.90024.figure1

DOI: 10.3897/neobiota.84.90024.figure10

DOI: 10.3897/neobiota.84.90024.figure11

DOI: 10.3897/neobiota.84.90024.figure2

DOI: 10.3897/neobiota.84.90024.figure3

DOI: 10.3897/neobiota.84.90024.figure4

DOI: 10.3897/neobiota.84.90024.figure5

DOI: 10.3897/neobiota.84.90024.figure6

DOI: 10.3897/neobiota.84.90024.figure7

DOI: 10.3897/neobiota.84.90024.figure8

DOI: 10.3897/neobiota.84.90024.figure9

DOI: 10.3897/neobiota.84.90024.suppl1

Language: Unknown

Publisher: Pensoft Publishers

Publication Date: 2023

detail.hit.zdb_id: 2628537-X

SSG: 21

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Validation of the RIM Score-COVID in the Spanish SEMI-COVID-19 Registry

Ramos-Rincón, José-Manuel ; Ventura, Paula Sol ; Casas-Rojo, José-Manuel ; [et al.]

Springer Science and Business Media LLC ; 2023

In: Internal and Emergency Medicine Vol. 18, No. 3 ( 2023-04), p. 907-915

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In: Internal and Emergency Medicine, Springer Science and Business Media LLC, Vol. 18, No. 3 ( 2023-04), p. 907-915

Type of Medium: Online Resource

ISSN: 1828-0447 , 1970-9366

URL: Article

DOI: 10.1007/s11739-023-03200-3

Language: English

Publisher: Springer Science and Business Media LLC

Publication Date: 2023

detail.hit.zdb_id: 2378342-4

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Figure 8b from: Datry T, Allen D, Argelich R, Barquin J, Bonada N, Boulton A, Branger F, Cai Y, Cañedo-Argüelles M, Cid N, Csabai Z, Dallimer M, de Araújo JC, Declerck S, Dekker T, Döll P, Encalada A, Forcellini M, Foulquier A, Heino J, Jabot F, Keszler P, Kopperoinen L, Kralisch S, Künne A, Lamouroux N, Lauvernet C, Lehtoranta V, Loskotová B, Marcé R, Martin Ortega J, Matauschek C, Miliša M, Mogyorósi S, Moya N, Müller Schmied H, Munné A, Munoz F, Mykrä H, Pal I, Paloniemi R, Pařil P, Pengal P, Pernecker B, Polášek M, Rezende C, Sabater S, Sarremejane R, Schmidt G, Senerpont Domis L, Singer G, Suárez E, Talluto M, Teurlincx S, Trautmann T, Truchy A, Tyllianakis E, Väisänen S, Varumo L, Vidal J-P, Vilmi A, Vinyoles D (2021) Securing Biodiversity, Functional Integrity, and Ecosystem Services in Drying River Networks (DRYvER). Research Ideas and Outcomes 7: e77750. https://doi.org/10.3897/rio.7.e77750

Datry, Thibault ; Allen, Daniel ; Argelich, Roger ; [et al.]

Pensoft Publishers ; 2021

In: Research Ideas and Outcomes Vol. 7 ( 2021-12-31)

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In: Research Ideas and Outcomes, Pensoft Publishers, Vol. 7 ( 2021-12-31)

Abstract: River networks are among Earth’s most threatened hot-spots of biodiversity and provide key ecosystem services (e.g., supply drinking water and food, climate regulation) essential to sustaining human well-being. Climate change and increased human water use are causing more rivers and streams to dry, with devastating impacts on biodiversity and ecosystem services. Currently, more than a half of the global river networks consist of drying channels, and these are expanding dramatically. However, drying river networks (DRNs) have received little attention from scientists and policy makers, and the public is unaware of their importance. Consequently, there is no effective integrated biodiversity conservation or ecosystem management strategy of DRNs. A multidisciplinary team of 25 experts from 11 countries in Europe, South America, China and the USA will build on EU efforts to assess the cascading effects of climate change on biodiversity, ecosystem functions and ecosystem services of DRNs through changes in flow regimes and water use. DRYvER (DRYing riVER networks) will gather and upscale empirical and modelling data from nine focal DRNs (case studies) in Europe (EU) and Community of Latin American and Caribbean States (CELAC) to develop a meta-system framework applicable to Europe and worldwide. It will also generate crucial knowledge-based strategies, tools and guidelines for economically-efficient adaptive management of DRNs. Working closely with stakeholders and end-users, DRYvER will co-develop strategies to mitigate and adapt to climate change impacts in DRNs, integrating hydrological, ecological (including nature-based solutions), socio-economic and policy perspectives. The end results of DRYvER will contribute to reaching the objectives of the Paris Agreement and placing Europe at the forefront of research on climate change.

Type of Medium: Online Resource

ISSN: 2367-7163

URL: Article

DOI: 10.3897/rio.7.e77750

DOI: 10.3897/rio.7.e77750.figure1

DOI: 10.3897/rio.7.e77750.figure2

DOI: 10.3897/rio.7.e77750.figure3

DOI: 10.3897/rio.7.e77750.figure4

DOI: 10.3897/rio.7.e77750.figure5

DOI: 10.3897/rio.7.e77750.figure6

DOI: 10.3897/rio.7.e77750.figure7

DOI: 10.3897/rio.7.e77750.figure8a

DOI: 10.3897/rio.7.e77750.figure8b

Language: Unknown

Publisher: Pensoft Publishers

Publication Date: 2021

detail.hit.zdb_id: 2833254-4

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Mortality reduction in older COVID-19-patients hospitalized in Spain during the second pandemic wave from the SEMI-COVID-19 Registry

Casas-Rojo, José-Manuel ; Antón-Santos, Juan-Miguel ; Millán-Núñez-Cortés, Jesús ; [et al.]

Springer Science and Business Media LLC ; 2023

In: Scientific Reports Vol. 13, No. 1 ( 2023-10-18)

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In: Scientific Reports, Springer Science and Business Media LLC, Vol. 13, No. 1 ( 2023-10-18)

Abstract: In 2020, the COVID-19 pandemic followed a two-wave pattern in most countries. Hospital admission for COVID-19 in one wave or another could have affected mortality, especially among the older persons. The objective of this study was to evaluate whether the admission of older patients during the different waves, before SARS-CoV-2 vaccination was available, was associated with a different mortality. We compared the mortality rates of patients hospitalized during 2020 before (first wave) and after (second wave) July 7, 2020, included in the SEMI-COVID-19 Registry, a large, multicenter, retrospective cohort of patients admitted to 126 Spanish hospitals for COVID-19. A multivariate logistic regression analysis was performed to control for changes in either the patient or disease profile. As of December 26, 2022, 22,494 patients had been included (17,784 from the first wave and 4710 from the second one). Overall mortality was 20.4% in the first wave and 17.2% in the second wave (risk difference (RD) − 3.2%; 95% confidence interval (95% CI) − 4.4 to − 2.0). Only patients aged 70 and older (10,973 patients: 8571 in the first wave and 2386 in the second wave) had a significant reduction in mortality (RD − 7.6%; 95% CI − 9.7 to − 5.5) (unadjusted relative risk reduction: 21.6%). After adjusting for age, comorbidities, variables related to the severity of the disease, and treatment received, admission during the second wave remained a protective factor. In Spain, patients aged 70 years and older admitted during the second wave of the COVID-19 pandemic had a significantly lower risk of mortality, except in severely dependent persons in need of corticosteroid treatment. This effect is independent of patient characteristics, disease severity, or treatment received. This suggests a protective effect of a better standard of care, greater clinical expertise, or a lesser degree of healthcare system overload.

Type of Medium: Online Resource

ISSN: 2045-2322

URL: Article

DOI: 10.1038/s41598-023-42735-5

Language: English

Publisher: Springer Science and Business Media LLC

Publication Date: 2023

detail.hit.zdb_id: 2615211-3

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Global variation in postoperative mortality and complications after cancer surgery: a multicentre, prospective cohort study in 82 countries

Knight, Stephen R ; Shaw, Catherine A ; Pius, Riinu ; [et al.]

Elsevier BV ; 2021

In: The Lancet Vol. 397, No. 10272 ( 2021-01), p. 387-397

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In: The Lancet, Elsevier BV, Vol. 397, No. 10272 ( 2021-01), p. 387-397

Type of Medium: Online Resource

ISSN: 0140-6736

URL: Article

DOI: 10.1016/S0140-6736(21)00001-5

RVK:

XA 10000

Language: English

Publisher: Elsevier BV

Publication Date: 2021

detail.hit.zdb_id: 2067452-1

detail.hit.zdb_id: 3306-6

detail.hit.zdb_id: 1476593-7

SSG: 5,21

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Effects of hospital facilities on patient outcomes after cancer surgery: an international, prospective, observational study

Knight, Stephen R ; Shaw, Catherine A ; Pius, Riinu ; [et al.]

Elsevier BV ; 2022

In: The Lancet Global Health Vol. 10, No. 7 ( 2022-07), p. e1003-e1011

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In: The Lancet Global Health, Elsevier BV, Vol. 10, No. 7 ( 2022-07), p. e1003-e1011

Type of Medium: Online Resource

ISSN: 2214-109X

URL: Article

DOI: 10.1016/S2214-109X(22)00168-1

Language: English

Publisher: Elsevier BV

Publication Date: 2022

detail.hit.zdb_id: 2723488-5

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Does admission acetylsalicylic acid uptake in hospitalized COVID-19 patients have a protective role? Data from the Spanish SEMI-COVID-19 Registry

Formiga, Francesc ; Rubio-Rivas, Manuel ; Mora-Luján, José María ; [et al.]

Springer Science and Business Media LLC ; 2022

In: Internal and Emergency Medicine Vol. 17, No. 3 ( 2022-04), p. 761-775

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In: Internal and Emergency Medicine, Springer Science and Business Media LLC, Vol. 17, No. 3 ( 2022-04), p. 761-775

Type of Medium: Online Resource

ISSN: 1828-0447 , 1970-9366

URL: Article

DOI: 10.1007/s11739-021-02870-1

Language: English

Publisher: Springer Science and Business Media LLC

Publication Date: 2022

detail.hit.zdb_id: 2378342-4

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Prospective observational cohort study on grading the severity of postoperative complications in global surgery research

International Surgical Outcomes Study (ISOS) group ; Abbott, T E F ; Greaves, K E ; [et al.]

Oxford University Press (OUP) ; 2019

In: British Journal of Surgery Vol. 106, No. 2 ( 2019-01-08), p. e73-e80

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In: British Journal of Surgery, Oxford University Press (OUP), Vol. 106, No. 2 ( 2019-01-08), p. e73-e80

Abstract: The Clavien–Dindo classification is perhaps the most widely used approach for reporting postoperative complications in clinical trials. This system classifies complication severity by the treatment provided. However, it is unclear whether the Clavien–Dindo system can be used internationally in studies across differing healthcare systems in high- (HICs) and low- and middle-income countries (LMICs). Methods This was a secondary analysis of the International Surgical Outcomes Study (ISOS), a prospective observational cohort study of elective surgery in adults. Data collection occurred over a 7-day period. Severity of complications was graded using Clavien–Dindo and the simpler ISOS grading (mild, moderate or severe, based on guided investigator judgement). Severity grading was compared using the intraclass correlation coefficient (ICC). Data are presented as frequencies and ICC values (with 95 per cent c.i.). The analysis was stratified by income status of the country, comparing HICs with LMICs. Results A total of 44 814 patients were recruited from 474 hospitals in 27 countries (19 HICs and 8 LMICs). Some 7508 patients (16·8 per cent) experienced at least one postoperative complication, equivalent to 11 664 complications in total. Using the ISOS classification, 5504 of 11 664 complications (47·2 per cent) were graded as mild, 4244 (36·4 per cent) as moderate and 1916 (16·4 per cent) as severe. Using Clavien–Dindo, 6781 of 11 664 complications (58·1 per cent) were graded as I or II, 1740 (14·9 per cent) as III, 2408 (20·6 per cent) as IV and 735 (6·3 per cent) as V. Agreement between classification systems was poor overall (ICC 0·41, 95 per cent c.i. 0·20 to 0·55), and in LMICs (ICC 0·23, 0·05 to 0·38) and HICs (ICC 0·46, 0·25 to 0·59). Conclusion Caution is recommended when using a treatment approach to grade complications in global surgery studies, as this may introduce bias unintentionally.

Type of Medium: Online Resource

ISSN: 0007-1323 , 1365-2168

URL: Article

DOI: 10.1002/bjs.11025

Language: English

Publisher: Oxford University Press (OUP)

Publication Date: 2019

detail.hit.zdb_id: 2006309-X

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Elective surgery system strengthening: development, measurement, and validation of the surgical preparedness index across 1632 hospitals in 119 countries

Glasbey, James C ; Abbott, Tom EF ; Ademuyiwa, Adesoji ; [et al.]

Elsevier BV ; 2022

In: The Lancet Vol. 400, No. 10363 ( 2022-11), p. 1607-1617

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In: The Lancet, Elsevier BV, Vol. 400, No. 10363 ( 2022-11), p. 1607-1617

Type of Medium: Online Resource

ISSN: 0140-6736

URL: Article

DOI: 10.1016/S0140-6736(22)01846-3

RVK:

XA 10000

Language: English

Publisher: Elsevier BV

Publication Date: 2022

detail.hit.zdb_id: 2067452-1

detail.hit.zdb_id: 3306-6

detail.hit.zdb_id: 1476593-7

SSG: 5,21

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A second update on mapping the human genetic architecture of COVID-19

The COVID-19 Host Genetics Initiative ; Kanai, Masahiro ; Andrews, Shea J. ; [et al.]

Springer Science and Business Media LLC ; 2023

In: Nature Vol. 621, No. 7977 ( 2023-09-07), p. E7-E26

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In: Nature, Springer Science and Business Media LLC, Vol. 621, No. 7977 ( 2023-09-07), p. E7-E26

Type of Medium: Online Resource

ISSN: 0028-0836 , 1476-4687

URL: Article

DOI: 10.1038/s41586-023-06355-3

RVK:

TA 1000

RVK:

UA 1000

RVK:

WA 15000

Language: English

Publisher: Springer Science and Business Media LLC

Publication Date: 2023

detail.hit.zdb_id: 120714-3

detail.hit.zdb_id: 1413423-8

SSG: 11

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