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  • 1
    In: North American Journal of Aquaculture, Wiley, Vol. 77, No. 3 ( 2015-07), p. 377-395
    Abstract: The Cle Elum Supplementation and Research Facility in the Yakima River basin, Washington, is an integrated spring Chinook Salmon Oncorhynchus tshawytscha hatchery program designed to test whether artificial propagation can increase natural production and harvest opportunities while keeping ecological and genetic impacts within acceptable limits. Only natural‐origin (naturally spawned) fish are used for hatchery broodstock. Spawning, incubation, and early rearing occur at a central facility; presmolts are transferred for final rearing, acclimation, and volitional release at sites adjacent to natural spawning areas, where returning adults can spawn with natural‐origin fish. The first wild broodstock were collected in 1997, and age‐4 adults have returned to the Yakima River since 2001. An unsupplemented population in the adjacent Naches River watershed provides a reference for evaluating environmental influences. The program has been comprehensively monitored from its inception. A synthesis of findings, many already published, is as follows: supplementation increased the harvest, redd counts, and spatial distribution of spawners; natural‐origin returns were maintained; straying to nontarget systems was negligible; natural‐origin females had slightly higher breeding success (production of surviving fry) in an artificial spawning channel, while the behavior and breeding success of natural‐ and hatchery‐origin males were similar; hatchery‐origin fish showed differences in morphometric and life history traits; high rates of hatchery age‐2 (minijack) production were reported, but the observed proportions of out‐migrating juvenile and adult (ages 4 and 5) returning males were comparable for hatchery‐ and natural‐origin fish; hatchery smolts did not affect the levels of pathogens in natural smolts; and the ecological interactions attributed to the program were within adopted guidelines. Continued study is required to assess the long‐term impacts on natural production and productivity.
    Type of Medium: Online Resource
    ISSN: 1522-2055 , 1548-8454
    Language: English
    Publisher: Wiley
    Publication Date: 2015
    detail.hit.zdb_id: 2192450-8
    detail.hit.zdb_id: 1482260-X
    SSG: 21,3
    SSG: 12
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  • 2
    In: Transactions of the American Fisheries Society, Wiley, Vol. 151, No. 3 ( 2022-05), p. 333-346
    Abstract: Juvenile males produced in spring Chinook Salmon Oncorhynchus tshawytscha hatchery programs can exhibit high rates of maturation in freshwater as 2‐year‐old “minijacks.” This phenomenon is associated with high feeding rates and increased size and/or growth that juveniles experience in the hatchery environment, though studies also support a genetic component affecting age of maturation among salmonids, including precocious maturation in freshwater. This prompted a study to test whether the age of natural‐origin spring Chinook Salmon broodstock affects the rate at which their hatchery‐raised male progeny mature as age‐2 minijacks. In three consecutive brood years, we factorially mated age‐4 adult females with age‐3, age‐4, and age‐5 adult (jacks) male broodstock. In the latter two brood years, we also incorporated age‐1 precocious parr (microjacks) as sires. After communal rearing to the smolt stage (age 1), male juveniles were characterized as immature or as maturing minijacks based on plasma 11‐ketotestosterone concentration, and each was identified to its respective full‐sib progeny group via genetic parentage analysis. A generalized linear mixed model, performed for each brood year separately, was used to characterize expected precocious maturation rates by sire age, while controlling for potential effects of smolt body weight and individual parent identities. Multiple comparisons across sire ages within brood years were used to evaluate relative rates of precocious maturation. Estimates of the probability of minijack maturation among families within sire ages and brood years varied from as much as 0% to 100%, and no consistent effect of sire age on precocious maturation rate was observed. Exploratory analyses investigating additional effects of egg size, dam length, and spawn date also failed to identify consistent predictors of precocious maturation. Instead, variability was largely attributed to both dam‐ and sire‐specific effects, indicating a heritable component to precocious maturation, though not detectably associated with other measured attributes.
    Type of Medium: Online Resource
    ISSN: 0002-8487 , 1548-8659
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2022
    detail.hit.zdb_id: 2192460-0
    SSG: 12
    SSG: 21,3
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  • 3
    Online Resource
    Online Resource
    Canadian Science Publishing ; 1995
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 52, No. 6 ( 1995-06-01), p. 1141-1149
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 52, No. 6 ( 1995-06-01), p. 1141-1149
    Abstract: Chum (Oncorhynchus keta) and sockeye salmon (O. nerka) fry immersed in strontium chloride solutions for 24 h had greater amounts of strontium in their otoliths, vertebrae, and opercula than controls. Exposure to a hyperosmotic bath prior to marking, and dimethyl sulfoxide and heat during the immersion period, slightly increased the uptake of strontium in some cases. Hemisections of otoliths taken from treated fish possessed a highly visible ring of deposited strontium when viewed with backscattered electron microscopy. The peak concentration of strontium in a ring was often two orders of magnitude higher than that found in otoliths taken from control fish or in preexisting growth areas of a treated otolith. Treated fish that had been reared for 21 months in freshwater were easily identified when their otoliths were examined with backscattered electron microscopy or Wavelength Dispersive Spectrometry. When marked fish weighed less than 15 g their otoliths were also distinguished from control specimens by using bulk Inductively Coupled Plasma Mass Spectrometry. This study showed that 24-h immersion in strontium chloride solutions produced easily detected and long-lived marks in Pacific salmon fry.
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 1995
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
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  • 4
    In: Transactions of the American Fisheries Society, Wiley, Vol. 137, No. 5 ( 2008-09), p. 1433-1445
    Abstract: Hatchery and wild female spring Chinook salmon Oncorhynchus tshawytscha from the upper Yakima River were compared to determine whether their reproductive traits had diverged after a single generation of artificial propagation. Fecundity, relative fecundity, individual egg mass, and total gamete mass were all significantly correlated with body length, while reproductive effort (gonadosomatic index) was not. Regressions of trait versus body length often differed significantly among brood years. Hatchery spring Chinook salmon were significantly smaller than wild females over the four brood years examined. After brood year and body length (when necessary) were accounted for, wild females had an average of 8.8% more total gamete mass, 0.8% more individual egg mass, 7.7% greater fecundity, and 0.8% greater reproductive effort than hatchery females. Relative fecundity (the number of eggs per centimeter of body length) was on average 1.3% greater in hatchery females. We also compared body size at yolk absorption and egg‐to‐fry survival of the progeny from hatchery‐by‐hatchery and wild‐by‐wild matings. After differences in egg size were accounted for, hatchery fry were on average 1.0% heavier than wild fry. Egg‐to‐fry survival rates varied among years, with no consistent difference between hatchery and wild fry. The relationships between reproductive traits and body length were not significantly altered by a single generation of hatchery exposure. However, because hatchery females had smaller body sizes, the distributions of linked traits, such as total gamete mass and fecundity, differed by as much as 0.6 SD, probably resulting in some fitness loss. Our data support the idea that a single generation of state‐of‐the‐art conservation hatchery propagation can produce fish with reproductive traits similar to those of wild fish, given comparable body size.
    Type of Medium: Online Resource
    ISSN: 0002-8487 , 1548-8659
    Language: English
    Publisher: Wiley
    Publication Date: 2008
    detail.hit.zdb_id: 2192460-0
    SSG: 12
    SSG: 21,3
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  • 5
    In: Evolutionary Applications, Wiley, Vol. 8, No. 10 ( 2015-12), p. 956-971
    Abstract: Captive breeding has the potential to rebuild depressed populations. However, associated genetic changes may decrease restoration success and negatively affect the adaptive potential of the entire population. Thus, approaches that minimize genetic risks should be tested in a comparative framework over multiple generations. Genetic diversity in two captive‐reared lines of a species of conservation interest, Chinook salmon ( Oncorhynchus tshawytscha ), was surveyed across three generations using genome‐wide approaches. Genetic divergence from the source population was minimal in an integrated line, which implemented managed gene flow by using only naturally‐born adults as captive broodstock, but significant in a segregated line, which bred only captive‐origin individuals. Estimates of effective number of breeders revealed that the rapid divergence observed in the latter was largely attributable to genetic drift. Three independent tests for signatures of adaptive divergence also identified temporal change within the segregated line, possibly indicating domestication selection. The results empirically demonstrate that using managed gene flow for propagating a captive‐reared population reduces genetic divergence over the short term compared to one that relies solely on captive‐origin parents. These findings complement existing studies of captive breeding, which typically focus on a single management strategy and examine the fitness of one or two generations.
    Type of Medium: Online Resource
    ISSN: 1752-4571 , 1752-4571
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2015
    detail.hit.zdb_id: 2405496-3
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  • 6
    In: Evolutionary Applications, Wiley, Vol. 11, No. 6 ( 2018-07), p. 853-868
    Abstract: A novel application of genomewide association analyses is to use trait‐associated loci to monitor the effects of conservation strategies on potentially adaptive genetic variation. Comparisons of fitness between captive‐ and wild‐origin individuals, for example, do not reveal how captive rearing affects genetic variation underlying fitness traits or which traits are most susceptible to domestication selection. Here, we used data collected across four generations to identify loci associated with six traits in adult Chinook salmon ( Oncorhynchus tshawytscha ) and then determined how two alternative management approaches for captive rearing affected variation at these loci. Loci associated with date of return to freshwater spawning grounds (return timing), length and weight at return, age at maturity, spawn timing, and daily growth coefficient were identified using 9108 restriction site‐associated markers and random forest, an approach suitable for polygenic traits. Mapping of trait‐associated loci, gene annotations, and integration of results across multiple studies revealed candidate regions involved in several fitness‐related traits. Genotypes at trait‐associated loci were then compared between two hatchery populations that were derived from the same source but are now managed as separate lines, one integrated with and one segregated from the wild population. While no broad‐scale change was detected across four generations, there were numerous regions where trait‐associated loci overlapped with signatures of adaptive divergence previously identified in the two lines. Many regions, primarily with loci linked to return and spawn timing, were either unique to or more divergent in the segregated line, suggesting that these traits may be responding to domestication selection. This study is one of the first to utilize genomic approaches to demonstrate the effectiveness of a conservation strategy, managed gene flow, on trait‐associated—and potentially adaptive—loci. The results will promote the development of trait‐specific tools to better monitor genetic change in captive and wild populations.
    Type of Medium: Online Resource
    ISSN: 1752-4571 , 1752-4571
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2018
    detail.hit.zdb_id: 2405496-3
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  • 7
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2000
    In:  Environmental Biology of Fishes Vol. 58, No. 1 ( 2000-05), p. 61-73
    In: Environmental Biology of Fishes, Springer Science and Business Media LLC, Vol. 58, No. 1 ( 2000-05), p. 61-73
    Type of Medium: Online Resource
    ISSN: 0378-1909 , 1573-5133
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2000
    detail.hit.zdb_id: 196790-3
    detail.hit.zdb_id: 1497685-7
    SSG: 21,3
    SSG: 12
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  • 8
    Online Resource
    Online Resource
    Wiley ; 1987
    In:  North American Journal of Fisheries Management Vol. 7, No. 4 ( 1987-10), p. 459-474
    In: North American Journal of Fisheries Management, Wiley, Vol. 7, No. 4 ( 1987-10), p. 459-474
    Type of Medium: Online Resource
    ISSN: 0275-5947 , 1548-8675
    Language: English
    Publisher: Wiley
    Publication Date: 1987
    detail.hit.zdb_id: 2192453-3
    SSG: 21,3
    SSG: 12
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  • 9
    In: Transactions of the American Fisheries Society, Wiley, Vol. 142, No. 2 ( 2013-03), p. 540-555
    Abstract: In male Chinook Salmon Oncorhynchus tshawytscha , age of maturation is phenotypically plastic, occurring at age 1 (referred to as precocious parr or microjack), age 2 (minijack), age 3 (jack), age 4, or age 5. Microjacks and minijacks are thought to forego migration to the ocean as smolts, instead remaining in headwaters and employing a “sneaking” strategy to fertilize eggs. We compared the prevalence of minijacks (minijack rate) among hatchery‐ and natural‐origin spring Chinook Salmon from the Yakima River, Washington, over seven brood years (2001–2007). We quantified minijack rates and sex ratios in the hatchery population prior to release and during out‐migration at a trap located 230 km downstream. Within this time period, we also monitored minijack rates in a 3‐year (brood years 2002–2004) growth study designed to reduce minijack production at the hatchery. Minijacks made up an average of 41% of the male population in the hatchery, but annual minijack rates varied in response to the growth rate or fish size at release. Average minijack rate was approximately 20% among out‐migrating hatchery fish, about half the rate found prior to release. Among out‐migrants, minijack rates of hatchery fish were approximately 10 times those of natural‐origin fish, but sex ratios were significantly skewed toward females in both hatchery‐ and natural‐origin groups. Data from this study and related studies suggest that the predominant age of early male maturation in the Yakima River and similar rivers is age 2 (minijack) in hatchery fish and age 1 (microjack) in natural‐origin fish. Based on this and other studies, we now recognize three minijack life history types in spring Chinook Salmon: resident, fluvial, and anadromous, depending on the migration pattern exhibited in the spring and summer. Finally, we discuss the broader impacts that high minijack production may have on the establishment of size‐at‐release targets for salmon supplementation programs in the future.
    Type of Medium: Online Resource
    ISSN: 0002-8487 , 1548-8659
    Language: English
    Publisher: Wiley
    Publication Date: 2013
    detail.hit.zdb_id: 2192460-0
    SSG: 12
    SSG: 21,3
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  • 10
    In: Transactions of the American Fisheries Society, Wiley, Vol. 137, No. 5 ( 2008-09), p. 1475-1489
    Abstract: First‐generation hatchery and wild spring Chinook salmon Oncorhynchus tshawytscha from the upper Yakima River, Washington, were placed into an artificial stream and allowed to spawn. Seven independent test groups were placed into the stream from 2001 through 2005. No differences were detected in the egg deposition rates of wild and hatchery females. Pedigree assignments based on microsatellite DNA, however, showed that the eggs deposited by wild females survived to the fry stage at a 5.6% higher rate than those spawned by hatchery females. Subtle differences between hatchery and wild females in redd abandonment, egg burial, and redd location choice may have been responsible for the difference observed. Body size did not affect the ability of females to spawn or the survival of their deposited eggs. How long a female lived was positively related to her breeding success, but female origin did not affect longevity. The density of females spawning in portions of the stream affected both egg deposition and egg‐to‐fry survival. No difference, however, was found in the overall distribution patterns of the two types of females. Other studies that have examined the effects of a single generation of hatchery culture on upper Yakima River Chinook salmon have disclosed similar low‐level effects on adult and juvenile traits. The cumulative effect of such differences will need to be considered when hatcheries are used to restore depressed populations of Chinook salmon.
    Type of Medium: Online Resource
    ISSN: 0002-8487 , 1548-8659
    Language: English
    Publisher: Wiley
    Publication Date: 2008
    detail.hit.zdb_id: 2192460-0
    SSG: 12
    SSG: 21,3
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