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Supplementary material 5 from: Eisenhauer N, Bonkowski M, Brose U, Buscot F, Durka W, Ebeling A, Fischer M, Gleixner G, Heintz-Buschart A, Hines J, Jesch A, Lange M, Meyer S, Roscher C, Scheu S, Schielzeth H, Schloter M, Schulz S, Unsicker S, van Dam NM, Weigelt A, Weisser WW, Wirth C, Wolf J, Schmid B (2019) Biotic interactions, community assembly, and eco-evolutionary dynamics as drivers of long-term biodiversity–ecosystem functioning relationships. Research Ideas and Outcomes 5: e47042. https://doi.org/10.3897/rio.5.e47042

Eisenhauer, Nico ; Bonkowski, Michael ; Brose, Ulrich ; [et al.]

Pensoft Publishers ; 2019

In: Research Ideas and Outcomes Vol. 5 ( 2019-10-04)

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In: Research Ideas and Outcomes, Pensoft Publishers, Vol. 5 ( 2019-10-04)

Abstract: The functioning and service provisioning of ecosystems in the face of anthropogenic environmental and biodiversity change is a cornerstone of ecological research. The last three decades of biodiversity–ecosystem functioning (BEF) research have provided compelling evidence for the significant positive role of biodiversity in the functioning of many ecosystems. Despite broad consensus of this relationship, the underlying ecological and evolutionary mechanisms have not been well understood. This complicates the transition from a description of patterns to a predictive science. The proposed Research Unit aims at filling this gap of knowledge by applying novel experimental and analytical approaches in one of the longest-running biodiversity experiments in the world: the Jena Experiment. The central aim of the Research Unit is to uncover the mechanisms that determine BEF relationships in the short- and in the long-term. Increasing BEF relationships with time in long-term experiments do not only call for a paradigm shift in the appreciation of the relevance of biodiversity change, they likely are key to understanding the mechanisms of BEF relationships in general. The subprojects of the proposed Research Unit fall into two tightly linked main categories with two research areas each that aim at exploring variation in community assembly processes and resulting differences in biotic interactions as determinants of the long-term BEF relationship. Subprojects under “Microbial community assembly” and “Assembly and functions of animal communities” mostly focus on plant diversity effects on the assembly of communities and their feedback effects on biotic interactions and ecosystem functions. Subprojects under “Mediators of plant-biotic interactions” and “Intraspecific diversity and micro-evolutionary changes” mostly focus on plant diversity effects on plant trait expression and micro-evolutionary adaptation, and subsequent feedback effects on biotic interactions and ecosystem functions. This unification of evolutionary and ecosystem processes requires collaboration across the proposed subprojects in targeted plant and soil history experiments using cutting-edge technology and will produce significant synergies and novel mechanistic insights into BEF relationships. The Research Unit of the Jena Experiment is uniquely positioned in this context by taking an interdisciplinary and integrative approach to capture whole-ecosystem responses to changes in biodiversity and to advance a vibrant research field.

Type of Medium: Online Resource

ISSN: 2367-7163

URL: Article

DOI: 10.3897/rio.5.e47042

DOI: 10.3897/rio.5.e47042.figure1

DOI: 10.3897/rio.5.e47042.figure2

DOI: 10.3897/rio.5.e47042.figure3

DOI: 10.3897/rio.5.e47042.figure4

DOI: 10.3897/rio.5.e47042.suppl1

DOI: 10.3897/rio.5.e47042.suppl2

DOI: 10.3897/rio.5.e47042.suppl3

DOI: 10.3897/rio.5.e47042.suppl4

DOI: 10.3897/rio.5.e47042.suppl5

Language: Unknown

Publisher: Pensoft Publishers

Publication Date: 2019

detail.hit.zdb_id: 2833254-4

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Influence of lung CT changes in chronic obstructive pulmonary disease (COPD) on the human lung microbiome

Engel, Marion ; Endesfelder, David ; Schloter-Hai, Brigitte ; [et al.]

Public Library of Science (PLoS) ; 2017

In: PLOS ONE Vol. 12, No. 7 ( 2017-7-13), p. e0180859-

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In: PLOS ONE, Public Library of Science (PLoS), Vol. 12, No. 7 ( 2017-7-13), p. e0180859-

Type of Medium: Online Resource

ISSN: 1932-6203

URL: Article

DOI: 10.1371/journal.pone.0180859

DOI: 10.1371/journal.pone.0180859.g001

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DOI: 10.1371/journal.pone.0180859.s007

DOI: 10.1371/journal.pone.0180859.s008

Language: English

Publisher: Public Library of Science (PLoS)

Publication Date: 2017

detail.hit.zdb_id: 2267670-3

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Temporal Dynamics of Abundance and Composition of Nitrogen-Fixing Communities across Agricultural Soils

Pereira e Silva, Michele C. ; Schloter-Hai, Brigitte ; Schloter, Michael ; [et al.]

Public Library of Science (PLoS) ; 2013

In: PLoS ONE Vol. 8, No. 9 ( 2013-9-13), p. e74500-

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In: PLoS ONE, Public Library of Science (PLoS), Vol. 8, No. 9 ( 2013-9-13), p. e74500-

Type of Medium: Online Resource

ISSN: 1932-6203

URL: Article

DOI: 10.1371/journal.pone.0074500

DOI: 10.1371/journal.pone.0074500.g001

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DOI: 10.1371/journal.pone.0074500.s009

DOI: 10.1371/journal.pone.0074500.s010

Language: English

Publisher: Public Library of Science (PLoS)

Publication Date: 2013

detail.hit.zdb_id: 2267670-3

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Dynamics of Soil Bacterial Communities in Response to Repeated Application of Manure Containing Sulfadiazine

Ding, Guo-Chun ; Radl, Viviane ; Schloter-Hai, Brigitte ; [et al.]

Public Library of Science (PLoS) ; 2014

In: PLoS ONE Vol. 9, No. 3 ( 2014-3-26), p. e92958-

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In: PLoS ONE, Public Library of Science (PLoS), Vol. 9, No. 3 ( 2014-3-26), p. e92958-

Type of Medium: Online Resource

ISSN: 1932-6203

URL: Article

DOI: 10.1371/journal.pone.0092958

DOI: 10.1371/journal.pone.0092958.g001

DOI: 10.1371/journal.pone.0092958.g002

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DOI: 10.1371/journal.pone.0092958.t001

DOI: 10.1371/journal.pone.0092958.t002

DOI: 10.1371/journal.pone.0092958.s001

Language: English

Publisher: Public Library of Science (PLoS)

Publication Date: 2014

detail.hit.zdb_id: 2267670-3

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Correction: Response of Archaeal and Bacterial Soil Communities to Changes Associated with Outdoor Cattle Overwintering

Chroňáková, Alica ; Schloter-Hai, Brigitte ; Radl, Viviane ; [et al.]

Public Library of Science (PLoS) ; 2015

In: PLOS ONE Vol. 10, No. 9 ( 2015-9-8), p. e0137815-

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In: PLOS ONE, Public Library of Science (PLoS), Vol. 10, No. 9 ( 2015-9-8), p. e0137815-

Type of Medium: Online Resource

ISSN: 1932-6203

URL: Article

DOI: 10.1371/journal.pone.0137815

Language: English

Publisher: Public Library of Science (PLoS)

Publication Date: 2015

detail.hit.zdb_id: 2267670-3

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pH as a Driver for Ammonia-Oxidizing Archaea in Forest Soils

Stempfhuber, Barbara ; Engel, Marion ; Fischer, Doreen ; [et al.]

Springer Science and Business Media LLC ; 2015

In: Microbial Ecology Vol. 69, No. 4 ( 2015-5), p. 879-883

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In: Microbial Ecology, Springer Science and Business Media LLC, Vol. 69, No. 4 ( 2015-5), p. 879-883

Type of Medium: Online Resource

ISSN: 0095-3628 , 1432-184X

URL: Article

DOI: 10.1007/s00248-014-0548-5

Language: English

Publisher: Springer Science and Business Media LLC

Publication Date: 2015

detail.hit.zdb_id: 1462065-0

detail.hit.zdb_id: 188257-0

SSG: 12

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Rhizosphere microbiomes of potato cultivated in the High Andes show stable and dynamic core microbiomes with different responses to plant development

Pfeiffer, Stefan ; Mitter, Birgit ; Oswald, Andreas ; [et al.]

Oxford University Press (OUP) ; 2017

In: FEMS Microbiology Ecology Vol. 93, No. 2 ( 2017-02), p. fiw242-

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In: FEMS Microbiology Ecology, Oxford University Press (OUP), Vol. 93, No. 2 ( 2017-02), p. fiw242-

Type of Medium: Online Resource

ISSN: 1574-6941

URL: Article

DOI: 10.1093/femsec/fiw242

Language: English

Publisher: Oxford University Press (OUP)

Publication Date: 2017

detail.hit.zdb_id: 1501712-6

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Nitrate induction and physiological responses of two maize lines differing in nitrogen use efficiency: effects on N availability, microbial diversity and enzyme activity in the rhizosphere

Varanini, Zeno ; Cesco, Stefano ; Tomasi, Nicola ; [et al.]

Springer Science and Business Media LLC ; 2018

In: Plant and Soil Vol. 422, No. 1-2 ( 2018-1), p. 331-347

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In: Plant and Soil, Springer Science and Business Media LLC, Vol. 422, No. 1-2 ( 2018-1), p. 331-347

Type of Medium: Online Resource

ISSN: 0032-079X , 1573-5036

URL: Article

DOI: 10.1007/s11104-017-3452-1

Language: English

Publisher: Springer Science and Business Media LLC

Publication Date: 2018

detail.hit.zdb_id: 1478535-3

detail.hit.zdb_id: 208908-7

SSG: 12

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Response of Archaeal and Bacterial Soil Communities to Changes Associated with Outdoor Cattle Overwintering

Chroňáková, Alica ; Schloter-Hai, Brigitte ; Radl, Viviane ; [et al.]

Public Library of Science (PLoS) ; 2015

In: PLOS ONE Vol. 10, No. 8 ( 2015-8-14), p. e0135627-

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In: PLOS ONE, Public Library of Science (PLoS), Vol. 10, No. 8 ( 2015-8-14), p. e0135627-

Type of Medium: Online Resource

ISSN: 1932-6203

URL: Article

DOI: 10.1371/journal.pone.0135627

DOI: 10.1371/journal.pone.0135627.g001

DOI: 10.1371/journal.pone.0135627.t001

DOI: 10.1371/journal.pone.0135627.t002

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DOI: 10.1371/journal.pone.0135627.s003

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DOI: 10.1371/journal.pone.0135627.s007

DOI: 10.1371/journal.pone.0135627.s008

DOI: 10.1371/journal.pone.0135627.s009

DOI: 10.1371/journal.pone.0135627.s010

Language: English

Publisher: Public Library of Science (PLoS)

Publication Date: 2015

detail.hit.zdb_id: 2267670-3

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Environmental factors determining distribution and activity of anammox bacteria in minerotrophic fen soils

Bagnoud, Alexandre ; Guye-Humbert, Sylvia ; Schloter-Hai, Brigitte ; [et al.]

Oxford University Press (OUP) ; 2020

In: FEMS Microbiology Ecology Vol. 96, No. 2 ( 2020-02-01)

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In: FEMS Microbiology Ecology, Oxford University Press (OUP), Vol. 96, No. 2 ( 2020-02-01)

Abstract: In contrast to the pervasive occurrence of denitrification in soils, anammox (anaerobic ammonium oxidation) is a spatially restricted process that depends on specific ecological conditions. To identify the factors that constrain the distribution and activity of anammox bacteria in terrestrial environments, we investigated four different soil types along a catena with opposing ecological gradients of nitrogen and water content, from an amended pasture to an ombrotrophic bog. Anammox was detected by polymerase chain reaction (PCR) and quantitative PCR (qPCR) only in the nitrophilic wet meadow and the minerotrophic fen, in soil sections remaining water-saturated for most of the year and whose interstitial water contained inorganic nitrogen. Contrastingly, aerobic ammonia oxidizing microorganisms were present in all examined samples and outnumbered anammox bacteria usually by at least one order of magnitude. 16S rRNA gene sequencing revealed a relatively high diversity of anammox bacteria with one Ca. Brocadia cluster. Three additional clusters could not be affiliated to known anammox genera, but have been previously detected in other soil systems. Soil incubations using 15N-labeled substrates revealed that anammox processes contributed about & lt;2% to total N2 formation, leaving nitrification and denitrification as the dominant N-removal mechanism in these soils that represent important buffer zones between agricultural land and ombrotrophic peat bogs.

Type of Medium: Online Resource

ISSN: 0168-6496 , 1574-6941

URL: Article

DOI: 10.1093/femsec/fiz191

RVK:

WA 15000

Language: English

Publisher: Oxford University Press (OUP)

Publication Date: 2020

detail.hit.zdb_id: 1501712-6

SSG: 12

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