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  • 1
    In: Scientific Data, Springer Science and Business Media LLC, Vol. 9, No. 1 ( 2022-08-01)
    Abstract: Academic researchers, government agencies, industry groups, and individuals have produced forecasts at an unprecedented scale during the COVID-19 pandemic. To leverage these forecasts, the United States Centers for Disease Control and Prevention (CDC) partnered with an academic research lab at the University of Massachusetts Amherst to create the US COVID-19 Forecast Hub. Launched in April 2020, the Forecast Hub is a dataset with point and probabilistic forecasts of incident cases, incident hospitalizations, incident deaths, and cumulative deaths due to COVID-19 at county, state, and national, levels in the United States. Included forecasts represent a variety of modeling approaches, data sources, and assumptions regarding the spread of COVID-19. The goal of this dataset is to establish a standardized and comparable set of short-term forecasts from modeling teams. These data can be used to develop ensemble models, communicate forecasts to the public, create visualizations, compare models, and inform policies regarding COVID-19 mitigation. These open-source data are available via download from GitHub, through an online API, and through R packages.
    Type of Medium: Online Resource
    ISSN: 2052-4463
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2022
    detail.hit.zdb_id: 2775191-0
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  • 2
    In: Blood, American Society of Hematology, Vol. 114, No. 22 ( 2009-11-20), p. 170-170
    Abstract: Abstract 170 TAK-442 is an oral, selective, direct competitive inhibitor of activated factor X (fXa). This phase 2, multicenter, randomized, parallel-group study compared a range of TAK-442 doses with enoxaparin for thromboprophylaxis after elective unilateral total knee arthroplasty. After surgery, males and females 18 years of age or older were randomly assigned to 1 of 7 treatment groups: TAK-442 at doses of 40 or 80 mg p.o. once daily (QD) or 10, 20, 40, or 80 mg p.o. twice daily (BID), or enoxaparin 30 mg s.c. BID (n=150 per group). Enoxaparin was given unblinded, whereas TAK-442 given double-blinded with regard to dose and regimen. The first dose of TAK-442 was administered 6-8 hours postoperatively and after hemostasis was established, while the first dose of enoxaparin was given 12-24 hours after surgery according to North American guidelines; TAK-442 and enoxaparin were given for 10 days and patients were followed for 30 days after the last dose of study drug. Bilateral ascending venography was performed after the last dose of study drug to screen for deep vein thrombosis (DVT). The primary efficacy endpoint was the composite of all-cause mortality, symptomatic and asymptomatic DVT, and pulmonary embolism (PE). The primary safety endpoint was major bleeding, based on a pre-specified bleeding scale. Independent, blinded committees adjudicated all suspected efficacy outcomes and bleeding events. Of the 1038 patients who received study drug and were included in the full analysis set (FAS) and safety population, 949 completed the study; 730 patients had evaluable venograms. Following the recommendation of the Data Safety Monitoring Board, the TAK-442 10 mg and 20 mg BID groups were discontinued prematurely because of lack of efficacy with respect to asymptomatic DVT. The incidences of the primary efficacy endpoint and its components in the population with evaluable endpoints, and of major bleeding in the safety population, are shown in the table.Values are n (%) unless otherwise specified.* P 〈 0.05 vs enoxaparin. Patients in the FAS exhibited a similar trend in efficacy, with incidences of the composite primary endpoint of 28.8%, 25.8%, 16.7%, 14.8%, 18.8%, and 10.6%, respectively, across the TAK-442 doses, and 14.9% for enoxaparin. The minimum effective dose of TAK-442 was determined to be 40 mg QD, while the maximum dose of 80 mg BID tended to be more effective than enoxaparin in this study. The frequency of major and clinically significant non-major (CSNM) bleeding was not dose-dependent or different from that seen with enoxaparin. Similarly, the frequency of liver function test abnormalities was not dose-dependent or different from that seen with enoxaparin. Treatment-emergent AEs leading to study drug discontinuation occurred in 5.5% of the TAK-442 subjects and 7.5% of the enoxaparin subjects. In addition, the overall incidence of AEs or SAEs in the TAK-442 treatment groups was not dose-dependent or greatly different from that seen with enoxaparin 30 mg BID. These data suggest that, at total daily doses of 40 to 160 mg, the efficacy of TAK-442 is similar to that of enoxaparin 30 mg BID in patients undergoing total knee replacement. The low incidence of major and CSNM bleeding suggests that TAK-442 has a favorable benefit to risk profile in this population. Disclosures: Weitz: Daiichi-Sankyo: Consultancy; Bayer: Consultancy; BMS: Consultancy; Pfizer: Consultancy; Boehringer-Ingelheim: Consultancy; Takeda Global Research & Development, Inc.: Consultancy; Astra-Zeneca: Consultancy; The Medicines Company: Consultancy; Merck: Consultancy. Cao:Takeda Global Research & Development, Inc.: Employment. Eriksson:Takeda Global Research & Development, Inc.: Consultancy, Honoraria; Astellas: Consultancy, Honoraria, Membership on an entity's Board of Directors or advisory committees, Research Funding, Speakers Bureau; Bayer: Consultancy, Honoraria, Membership on an entity's Board of Directors or advisory committees, Research Funding, Speakers Bureau; Boehringer Ingelheim: Consultancy, Honoraria, Membership on an entity's Board of Directors or advisory committees, Speakers Bureau. Fisher:Bristol Myers Squibb: Research Funding; Takeda Global Research & Development, Inc.: Honoraria; Bayer: Consultancy, Honoraria, Research Funding; sanofi-aventis: Honoraria, Research Funding, Speakers Bureau; Boeringer-Ingelhiem: Consultancy, Speakers Bureau. Kupfer:Takeda Global Research & Development, Inc.: Employment. Raskob:Takeda Global Research & Development, Inc.: Consultancy; Bayer: Consultancy; BMS: Consultancy; Boehringer –Ingelheim: Consultancy; Daiichi-Sankyo: Consultancy; Johnson and Johnson: Consultancy; Pfizer: Consultancy; sanofi-aventis: Consultancy. Spaeder:Takeda Global Research & Development, Inc.: Employment, Equity Ownership. Turpie:Takeda Global Research & Development, Inc.: Consultancy; Astellas: Consultancy; Portola: Consultancy; Bayer: Consultancy; Johnson & Johnson: Consultancy.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2009
    detail.hit.zdb_id: 1468538-3
    detail.hit.zdb_id: 80069-7
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  • 3
    In: G3 Genes|Genomes|Genetics, Oxford University Press (OUP), Vol. 5, No. 5 ( 2015-05-01), p. 719-740
    Abstract: The Muller F element (4.2 Mb, ~80 protein-coding genes) is an unusual autosome of Drosophila melanogaster; it is mostly heterochromatic with a low recombination rate. To investigate how these properties impact the evolution of repeats and genes, we manually improved the sequence and annotated the genes on the D. erecta, D. mojavensis, and D. grimshawi F elements and euchromatic domains from the Muller D element. We find that F elements have greater transposon density (25–50%) than euchromatic reference regions (3–11%). Among the F elements, D. grimshawi has the lowest transposon density (particularly DINE-1: 2% vs. 11–27%). F element genes have larger coding spans, more coding exons, larger introns, and lower codon bias. Comparison of the Effective Number of Codons with the Codon Adaptation Index shows that, in contrast to the other species, codon bias in D. grimshawi F element genes can be attributed primarily to selection instead of mutational biases, suggesting that density and types of transposons affect the degree of local heterochromatin formation. F element genes have lower estimated DNA melting temperatures than D element genes, potentially facilitating transcription through heterochromatin. Most F element genes (~90%) have remained on that element, but the F element has smaller syntenic blocks than genome averages (3.4–3.6 vs. 8.4–8.8 genes per block), indicating greater rates of inversion despite lower rates of recombination. Overall, the F element has maintained characteristics that are distinct from other autosomes in the Drosophila lineage, illuminating the constraints imposed by a heterochromatic milieu.
    Type of Medium: Online Resource
    ISSN: 2160-1836
    Language: English
    Publisher: Oxford University Press (OUP)
    Publication Date: 2015
    detail.hit.zdb_id: 2629978-1
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  • 4
    In: Thrombosis and Haemostasis, Georg Thieme Verlag KG, Vol. 104, No. 12 ( 2010), p. 1150-1157
    Abstract: This multicentre dose-finding study compared TAK-442, an oral factor Xa inhibitor, with enoxaparin for thromboprophylaxis after knee arthroplasty. In this parallel group study, patients were randomised to oral TAK-442 (40 or 80 mg once-daily [QD] or 10, 20, 40, or 80 mg twice-daily [BID] started 6–8 hours postoperatively), which was blinded as to dose, or to open-label subcutaneous enoxaparin (30 mg BID starting 12–24 hours postoperatively) for 10 days. Treatments were continued until bilateral venography was performed (maximum of 14 days). The primary efficacy endpoint was the composite of any deep-vein thrombosis, non-fatal pulmonary embolism or all-cause mortality, while the primary safety endpoint was major bleeding. Of 1,038 patients randomised who received at least one dose of study drug, 949 completed the study and 730 (76.9%) were evaluable for the primary efficacy analysis. Recruitment into the 10 and 20 mg BID dose groups was stopped early because the incidences of the primary efficacy endpoint were significantly higher than that with enoxaparin. The primary efficacy endpoint occurred in 22.0% of patients given enoxaparin and in 39.0%, 38.4%, 23.5%, 21.4%, 26.8%, and 14.3% of those receiving TAK-442 10 mg BID, 20 mg BID, 40 mg QD, 40 mg BID, 80 mg QD, and 80 mg BID, respectively. The incidences of major and clinically relevant non-major bleeding with TAK-442 were not dose-dependent or different from that with enoxaparin. All TAK-442 doses except 10 and 20 mg BID displayed similar efficacy and safety profiles to enoxaparin.
    Type of Medium: Online Resource
    ISSN: 0340-6245 , 2567-689X
    Language: English
    Publisher: Georg Thieme Verlag KG
    Publication Date: 2010
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  • 5
    In: Thrombosis and Haemostasis, Georg Thieme Verlag KG, Vol. 111, No. 06 ( 2014), p. 1141-1152
    Abstract: TAK-442 is an oral direct factor Xa inhibitor. We sought to determine the dose-dependent effect of TAK-442 on major bleeding when added to standard treatment in stabilised patients with acute coronary syndrome (ACS). In this phase II double-blind study, 2,753 ACS patients were randomised to TAK-442 or placebo in addition to usual care using a three-stage adaptive design. Patients were randomised to placebo in all stages, but doses of TAK-442 escalated from 10 mg BID, 20 mg twice-daily (BID), or 40 mg once-daily (QD) in stage 1; to 40 mg BID, 80 mg QD, or 80 mg BID in stage 2; and to 160 mg QD or 120 mg BID in stage 3. Study drug was started 36 hours after emergent treatment of ACS and within seven days of admission, and continued for 24 weeks. The primary endpoint was incidence of TIMI (thrombolysis in myocardial infarction) major bleeding. TIMI major bleeding incidence was low, but higher with the pooled TAK-442 doses than with placebo (17 [0.9%] vs 4 [0.5%] ; p=0.47), although the difference was neither significant nor dose-dependent. However, a dose response was evident when using the modified ISTH scale. The incidence of cardiovascular events was similar among TAK-442 dose groups and placebo. When administered over a wide range of doses after an ACS event, TAK-442 treatment did not result in a dose-dependent increase in TIMI major bleeding, but increased bleeding was observed when a more sensitive bleeding scale was used. There was no evidence for efficacy.
    Type of Medium: Online Resource
    ISSN: 0340-6245 , 2567-689X
    Language: English
    Publisher: Georg Thieme Verlag KG
    Publication Date: 2014
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  • 6
    In: JAMA Network Open, American Medical Association (AMA), Vol. 6, No. 1 ( 2023-01-03), p. e2248987-
    Abstract: Data are limited regarding adverse reactions after COVID-19 vaccination in patients with a history of multisystem inflammatory syndrome in children (MIS-C). The lack of vaccine safety data in this unique population may cause hesitancy and concern for many families and health care professionals. Objective To describe adverse reactions following COVID-19 vaccination in patients with a history of MIS-C. Design, Setting, and Participants In this multicenter cross-sectional study including 22 North American centers participating in a National Heart, Lung, and Blood Institute, National Institutes of Health–sponsored study, Long-Term Outcomes After the Multisystem Inflammatory Syndrome in Children (MUSIC), patients with a prior diagnosis of MIS-C who were eligible for COVID-19 vaccination (age ≥5 years; ≥90 days after MIS-C diagnosis) were surveyed between December 13, 2021, and February 18, 2022, regarding COVID-19 vaccination status and adverse reactions. Exposures COVID-19 vaccination after MIS-C diagnosis. Main Outcomes and Measures The main outcome was adverse reactions following COVID-19 vaccination. Comparisons were made using the Wilcoxon rank sum test for continuous variables and the χ 2 or Fisher exact test for categorical variables. Results Of 385 vaccine-eligible patients who were surveyed, 185 (48.1%) received at least 1 vaccine dose; 136 of the vaccinated patients (73.5%) were male, and the median age was 12.2 years (IQR, 9.5-14.7 years). Among vaccinated patients, 1 (0.5%) identified as American Indian/Alaska Native, non-Hispanic; 9 (4.9%) as Asian, non-Hispanic; 45 (24.3%) as Black, non-Hispanic; 59 (31.9%) as Hispanic or Latino; 53 (28.6%) as White, non-Hispanic; 2 (1.1%) as multiracial, non-Hispanic; and 2 (1.1%) as other, non-Hispanic; 14 (7.6%) had unknown or undeclared race and ethnicity. The median time from MIS-C diagnosis to first vaccine dose was 9.0 months (IQR, 5.1-11.9 months); 31 patients (16.8%) received 1 dose, 142 (76.8%) received 2 doses, and 12 (6.5%) received 3 doses. Almost all patients received the BNT162b2 vaccine (347 of 351 vaccine doses [98.9%]). Minor adverse reactions were observed in 90 patients (48.6%) and were most often arm soreness (62 patients [33.5%] ) and/or fatigue (32 [17.3%]). In 32 patients (17.3%), adverse reactions were treated with medications, most commonly acetaminophen (21 patients [11.4%] ) or ibuprofen (11 [5.9%]). Four patients (2.2%) sought medical evaluation, but none required testing or hospitalization. There were no patients with any serious adverse events, including myocarditis or recurrence of MIS-C. Conclusions and Relevance In this cross-sectional study of patients with a history of MIS-C, no serious adverse events were reported after COVID-19 vaccination. These findings suggest that the safety profile of COVID-19 vaccination administered at least 90 days following MIS-C diagnosis appears to be similar to that in the general population.
    Type of Medium: Online Resource
    ISSN: 2574-3805
    Language: English
    Publisher: American Medical Association (AMA)
    Publication Date: 2023
    detail.hit.zdb_id: 2931249-8
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  • 7
    In: Vaccine, Elsevier BV, Vol. 27, No. 44 ( 2009-10), p. 6143-6147
    Type of Medium: Online Resource
    ISSN: 0264-410X
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2009
    detail.hit.zdb_id: 1468474-3
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  • 8
    Online Resource
    Online Resource
    Oxford University Press (OUP) ; 2021
    In:  Journal of the American Medical Informatics Association Vol. 28, No. 4 ( 2021-03-18), p. 733-743
    In: Journal of the American Medical Informatics Association, Oxford University Press (OUP), Vol. 28, No. 4 ( 2021-03-18), p. 733-743
    Abstract: We aim to develop a hybrid model for earlier and more accurate predictions for the number of infected cases in pandemics by (1) using patients’ claims data from different counties and states that capture local disease status and medical resource utilization; (2) utilizing demographic similarity and geographical proximity between locations; and (3) integrating pandemic transmission dynamics into a deep learning model. Materials and Methods We proposed a spatio-temporal attention network (STAN) for pandemic prediction. It uses a graph attention network to capture spatio-temporal trends of disease dynamics and to predict the number of cases for a fixed number of days into the future. We also designed a dynamics-based loss term for enhancing long-term predictions. STAN was tested using both real-world patient claims data and COVID-19 statistics over time across US counties. Results STAN outperforms traditional epidemiological models such as susceptible-infectious-recovered (SIR), susceptible-exposed-infectious-recovered (SEIR), and deep learning models on both long-term and short-term predictions, achieving up to 87% reduction in mean squared error compared to the best baseline prediction model. Conclusions By combining information from real-world claims data and disease case counts data, STAN can better predict disease status and medical resource utilization.
    Type of Medium: Online Resource
    ISSN: 1527-974X
    Language: English
    Publisher: Oxford University Press (OUP)
    Publication Date: 2021
    detail.hit.zdb_id: 2018371-9
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  • 9
    Online Resource
    Online Resource
    Elsevier BV ; 2017
    In:  Journal of the American College of Cardiology Vol. 69, No. 11 ( 2017-03), p. 611-
    In: Journal of the American College of Cardiology, Elsevier BV, Vol. 69, No. 11 ( 2017-03), p. 611-
    Type of Medium: Online Resource
    ISSN: 0735-1097
    RVK:
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2017
    detail.hit.zdb_id: 1468327-1
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  • 10
    In: Pharmacoepidemiology and Drug Safety, Wiley, Vol. 23, No. 12 ( 2014-12), p. 1294-1302
    Type of Medium: Online Resource
    ISSN: 1053-8569
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2014
    detail.hit.zdb_id: 1491218-1
    SSG: 15,3
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