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Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition) 1

Klionsky, Daniel J. ; Abdel-Aziz, Amal Kamal ; Abdelfatah, Sara ; [et al.]

Informa UK Limited ; 2021

In: Autophagy Vol. 17, No. 1 ( 2021-01-02), p. 1-382

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In: Autophagy, Informa UK Limited, Vol. 17, No. 1 ( 2021-01-02), p. 1-382

Type of Medium: Online Resource

ISSN: 1554-8627 , 1554-8635

URL: Article

DOI: 10.1080/15548627.2020.1797280

Language: English

Publisher: Informa UK Limited

Publication Date: 2021

detail.hit.zdb_id: 2262043-6

SSG: 12

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Endocytosis and signaling

Platta, Harald W ; Stenmark, Harald

Elsevier BV ; 2011

In: Current Opinion in Cell Biology Vol. 23, No. 4 ( 2011-8), p. 393-403

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In: Current Opinion in Cell Biology, Elsevier BV, Vol. 23, No. 4 ( 2011-8), p. 393-403

Type of Medium: Online Resource

ISSN: 0955-0674

URL: Article

DOI: 10.1016/j.ceb.2011.03.008

Language: English

Publisher: Elsevier BV

Publication Date: 2011

detail.hit.zdb_id: 2013029-6

SSG: 12

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Regulation of the Tumor-Suppressor Function of the Class III Phosphatidylinositol 3-Kinase Complex by Ubiquitin and SUMO

Reidick, Christina ; El Magraoui, Fouzi ; Meyer, Helmut ; [et al.]

MDPI AG ; 2014

In: Cancers Vol. 7, No. 1 ( 2014-12-23), p. 1-29

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In: Cancers, MDPI AG, Vol. 7, No. 1 ( 2014-12-23), p. 1-29

Type of Medium: Online Resource

ISSN: 2072-6694

URL: Article

DOI: 10.3390/cancers7010001

Language: English

Publisher: MDPI AG

Publication Date: 2014

detail.hit.zdb_id: 2527080-1

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The TLR4 adaptor TRAM controls the phagocytosis of Gram-negative bacteria by interacting with the Rab11-family interacting protein 2

Skjesol, Astrid ; Yurchenko, Mariia ; Bösl, Korbinian ; [et al.]

Public Library of Science (PLoS) ; 2019

In: PLOS Pathogens Vol. 15, No. 3 ( 2019-3-18), p. e1007684-

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In: PLOS Pathogens, Public Library of Science (PLoS), Vol. 15, No. 3 ( 2019-3-18), p. e1007684-

Type of Medium: Online Resource

ISSN: 1553-7374

URL: Article

DOI: 10.1371/journal.ppat.1007684

DOI: 10.1371/journal.ppat.1007684.g001

DOI: 10.1371/journal.ppat.1007684.g002

DOI: 10.1371/journal.ppat.1007684.g003

DOI: 10.1371/journal.ppat.1007684.g004

DOI: 10.1371/journal.ppat.1007684.g005

DOI: 10.1371/journal.ppat.1007684.g006

DOI: 10.1371/journal.ppat.1007684.g007

DOI: 10.1371/journal.ppat.1007684.g008

DOI: 10.1371/journal.ppat.1007684.t001

DOI: 10.1371/journal.ppat.1007684.s001

DOI: 10.1371/journal.ppat.1007684.s002

DOI: 10.1371/journal.ppat.1007684.s003

DOI: 10.1371/journal.ppat.1007684.s004

DOI: 10.1371/journal.ppat.1007684.s005

DOI: 10.1371/journal.ppat.1007684.s006

DOI: 10.1371/journal.ppat.1007684.s007

DOI: 10.1371/journal.ppat.1007684.s008

DOI: 10.1371/journal.ppat.1007684.s009

DOI: 10.1371/journal.ppat.1007684.s010

DOI: 10.1371/journal.ppat.1007684.s011

DOI: 10.1371/journal.ppat.1007684.s012

DOI: 10.1371/journal.ppat.1007684.s013

Language: English

Publisher: Public Library of Science (PLoS)

Publication Date: 2019

detail.hit.zdb_id: 2205412-1

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Ubiquitination and phosphorylation of Beclin 1 and its binding partners: Tuning class III phosphatidylinositol 3-kinase activity and tumor suppression

Abrahamsen, Hilde ; Stenmark, Harald ; Platta, Harald W.

Wiley ; 2012

In: FEBS Letters Vol. 586, No. 11 ( 2012-06-04), p. 1584-1591

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In: FEBS Letters, Wiley, Vol. 586, No. 11 ( 2012-06-04), p. 1584-1591

Type of Medium: Online Resource

ISSN: 0014-5793

URL: Article

DOI: 10.1016/j.febslet.2012.04.046

RVK:

WA 15000

Language: English

Publisher: Wiley

Publication Date: 2012

detail.hit.zdb_id: 1460391-3

SSG: 12

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The PtdIns3P‐Binding Protein Phafin 2 Mediates Epidermal Growth Factor Receptor Degradation by Promoting Endosome Fusion

Pedersen, Nina Marie ; Raiborg, Camilla ; Brech, Andreas ; [et al.]

Wiley ; 2012

In: Traffic Vol. 13, No. 11 ( 2012-11), p. 1547-1563

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In: Traffic, Wiley, Vol. 13, No. 11 ( 2012-11), p. 1547-1563

Abstract: Phosphatidylinositol 3‐phosphate ( PtdIns3P ) orchestrates endosomal cargo transport, fusion and motility by recruiting FYVE or PX domain‐containing effector proteins to endosomal membranes. In an attempt to discover novel PtdIns3P effectors involved in the termination of growth factor receptor signalling, we performed an siRNA screen for epidermal growth factor ( EGF ) degradation, targeting FYVE and PX domain proteins in the human proteome. This screen identified several potential regulators of EGF degradation, including HRS (used as positive control), PX kinase, MTMR4 and Phafin2/ PLEKHF2 . As Phafin2 has not previously been shown to be required for EGF receptor ( EGFR ) degradation, we performed further functional studies on this protein. Loss of Phafin2 was found to decrease early endosome size, whereas overexpression of Phafin2 resulted in enlarged endosomes. Moreover, both the EGFR and the fluid‐phase marker dextran were retained in abnormally small endosomes in Phafin2 ‐depleted cells. In yeast two‐hybrid analysis we identified Phafin2 as a novel interactor of the endosomal‐tethering protein EEA1 , and Phafin2 colocalized strongly with EEA1 in microdomains of the endosome membrane. Our results suggest that Phafin2 controls receptor trafficking and fluid‐phase transport through early endosomes by facilitating endosome fusion in concert with EEA1 .

Type of Medium: Online Resource

ISSN: 1398-9219 , 1600-0854

URL: Issue

URL: Article

DOI: 10.1111/tra.2012.13.issue-11

DOI: 10.1111/j.1600-0854.2012.01400.x

Language: English

Publisher: Wiley

Publication Date: 2012

detail.hit.zdb_id: 2020962-9

SSG: 12

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The Rab11a GTPase Controls Toll-like Receptor 4-Induced Activation of Interferon Regulatory Factor-3 on Phagosomes

Husebye, Harald ; Aune, Marie Hjelmseth ; Stenvik, Jørgen ; [et al.]

Elsevier BV ; 2010

In: Immunity Vol. 33, No. 4 ( 2010-10), p. 583-596

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In: Immunity, Elsevier BV, Vol. 33, No. 4 ( 2010-10), p. 583-596

Type of Medium: Online Resource

ISSN: 1074-7613

URL: Article

DOI: 10.1016/j.immuni.2010.09.010

RVK:

XA 48754.8

Language: English

Publisher: Elsevier BV

Publication Date: 2010

detail.hit.zdb_id: 2001966-X

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Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition)

Klionsky, Daniel J ; Abdelmohsen, Kotb ; Abe, Akihisa ; [et al.]

Informa UK Limited ; 2016

In: Autophagy Vol. 12, No. 1 ( 2016-01-02), p. 1-222

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In: Autophagy, Informa UK Limited, Vol. 12, No. 1 ( 2016-01-02), p. 1-222

Type of Medium: Online Resource

ISSN: 1554-8627 , 1554-8635

URL: Article

DOI: 10.1080/15548627.2015.1100356

Language: English

Publisher: Informa UK Limited

Publication Date: 2016

detail.hit.zdb_id: 2262043-6

SSG: 12

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Endocytic pathways regulate Toll-like receptor 4 signaling and link innate and adaptive immunity

Husebye, Harald ; Halaas, Øyvind ; Stenmark, Harald ; [et al.]

Wiley ; 2006

In: The EMBO Journal Vol. 25, No. 4 ( 2006-2-22), p. 683-692

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In: The EMBO Journal, Wiley, Vol. 25, No. 4 ( 2006-2-22), p. 683-692

Type of Medium: Online Resource

ISSN: 0261-4189 , 1460-2075

URL: Article

DOI: 10.1038/sj.emboj.7600991

RVK:

WA 15000

Language: Unknown

Publisher: Wiley

Publication Date: 2006

detail.hit.zdb_id: 1467419-1

detail.hit.zdb_id: 586044-1

SSG: 12

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Nedd4-dependent lysine-11-linked polyubiquitination of the tumour suppressor Beclin 1

Platta, Harald W. ; Abrahamsen, Hilde ; Thoresen, Sigrid B. ; [et al.]

Portland Press Ltd. ; 2012

In: Biochemical Journal Vol. 441, No. 1 ( 2012-01-01), p. 399-406

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In: Biochemical Journal, Portland Press Ltd., Vol. 441, No. 1 ( 2012-01-01), p. 399-406

Abstract: Beclin 1, a subunit of the class III phosphatidylinositol 3-kinase complex, is a tumour suppressor with a central role in endocytic trafficking, cytokinesis and the cross-regulation between autophagy and apoptosis. Interestingly, not only reduced expression but also overexpression of Beclin 1 is correlated with cancer development and metastasis. Thus it seems necessary for the cell to balance the protein levels of Beclin 1. In the present study we describe a regulatory link between Beclin 1 and the ubiquitin ligase Nedd4 (neural-precursor-cell-expressed developmentally down-regulated 4). We establish Nedd4 as a novel binding partner of Beclin 1 and demonstrate that Nedd4 polyubiquitinates Beclin 1 with Lys11- and Lys63-linked chains. Importantly, Nedd4 expression controls the stability of Beclin 1, and depletion of the Beclin 1-interacting protein VPS34 causes Nedd4-mediated proteasomal degradation of Beclin 1 via Lys11-linked polyubiquitin chains. Beclin 1 is thus the first tumour suppressor reported to be controlled by Lys11-linked polyubiquitination.

Type of Medium: Online Resource

ISSN: 0264-6021 , 1470-8728

URL: Article

DOI: 10.1042/BJ20111424

RVK:

WA 15000

Language: English

Publisher: Portland Press Ltd.

Publication Date: 2012

detail.hit.zdb_id: 1473095-9

SSG: 12

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