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  • 1
    In: British Journal of Haematology, Wiley, Vol. 170, No. 6 ( 2015-09), p. 826-836
    Abstract: Fanconi anaemia ( FA ) is an inherited disorder characterized by pancytopenia, congenital malformations and a predisposition to develop malignancies. Alterations in the haematopoietic microenvironment of FA patients have been reported, but little is known regarding the components of their bone marrow ( BM ) stroma. We characterized mesenchymal stromal cells ( MSC s) isolated from BM of 18 FA patients both before and after allogeneic haematopoietic stem cell transplantation ( HSCT ). Morphology, fibroblast colony‐forming unit ( CFU ‐F) ability, proliferative capacity, immunophenotype, differentiation potential, ability to support long‐term haematopoiesis and immunomodulatory properties of FA ‐ MSC s were analysed and compared with those of MSC s expanded from 15 age‐matched healthy donors ( HD ‐ MSC s). FA ‐ MSC s were genetically characterized through conventional karyotyping, diepoxybutane‐test and array‐comparative genomic hybridization. FA ‐ MSC s generated before and after HSCT were compared. Morphology, immunophenotype, differentiation potential, ability in vitro to inhibit mitogen‐induced T‐cell proliferation and to support long‐term haematopoiesis did not differ between FA ‐ MSC s and HD ‐ MSC s. CFU ‐F ability and proliferative capacity of FA ‐ MSC s isolated after HSCT were significantly lower than those of HD ‐ MSC s. FA ‐ MSC s reached senescence significantly earlier than HD ‐ MSC s and showed spontaneous chromosome fragility. Our findings indicate that FA ‐ MSC s are defective in their ability to survive in vitro and display spontaneous chromosome breakages; whether these defects are involved in pathophysiology of BM failure syndromes deserves further investigation.
    Type of Medium: Online Resource
    ISSN: 0007-1048 , 1365-2141
    URL: Issue
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    Language: English
    Publisher: Wiley
    Publication Date: 2015
    detail.hit.zdb_id: 1475751-5
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  • 2
    In: American Journal of Hematology, Wiley, Vol. 93, No. 5 ( 2018-05), p. 615-622
    Abstract: Splenic hematopoiesis is a major feature in the course of myelofibrosis (MF). In fact, the spleen of patients with MF contains malignant hematopoietic stem cells retaining a complete differentiation program, suggesting both a pivotal role of the spleen in maintaining the disease and a tight regulation of hematopoiesis by the splenic microenvironment, in particular by mesenchymal stromal cells (MSCs). Little is known about splenic MSCs (Sp‐MSCs), both in normal and in pathological context. In this work, we have in vitro expanded and characterized Sp‐MSCs from 25 patients with MF and 13 healthy subjects (HS). They shared similar phenotype, growth kinetics, and differentiation capacity. However, MF Sp‐MSCs expressed significant lower levels of nestin, and favored megakaryocyte (Mk) differentiation in vitro at a larger extent than their normal counterpart. Moreover, they showed a significant upregulation of matrix metalloprotease 2 ( MMP2 ) and fibronectin 1 ( FN1 ) genes both at mRNA expression and at protein level, and, finally, developed genetic abnormalities which were never detected in HS‐derived Sp‐MSCs. Our data point toward the existence of a defective splenic niche in patients with MF that could be responsible of some pathological features of the disease, including the increased trafficking of CD34+ cells and the expansion of the megakaryocytic lineage.
    Type of Medium: Online Resource
    ISSN: 0361-8609 , 1096-8652
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2018
    detail.hit.zdb_id: 1492749-4
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  • 3
    In: Blood, American Society of Hematology, Vol. 110, No. 11 ( 2007-11-16), p. 4224-4224
    Abstract: Chromosome 3q defects, namely inv(3)(q21q26)/t(3,3)(q21;q26), are revealed in about 2.5% of AML and in rare MDS patients (pts), are associated with a normal/high platelet count, tri-lineage dysplasia, resistance to intensive chemotherapy and poor survival. In these disorders ectopic EVI1 expression is the pathogenetically relevant molecular lesion. However, several pts with 3q21q26 rearrangements lack EVI1 expression and 9% of those without 3q21q26 defects present EVI1 over-expression. In addition, FISH, which can be used as an alternative tool for or an adjunct to RT-PCR to discover any EVI1 rearrangement, revealed an important breakpoint heterogeneity within this chromosomal region. Based on the above data, FISH was used to investigate 12 pts (7 MDS and 5 AML) with 3q21q26 rearrangements on conventional cytogenetics (CC). The goals of our study were to establish the incidence of EVI1 defects and to reveal any difference in morphological features and disease outcome between pts with and without EVI1 defects. The 12 pts were 4 females and 8 males with a median age of 60 years (range 35–80). Median follow-up was 22 months (range. 2–40). According to WHO classification, 2 MDS pts were diagnosed as Refractory Cytopenia with Multilineage Dysplasia (RCMD) and 5 as Refractory Anemia with Excess of Blasts type 2 (RAEB-2). Four of these 7 pts progressed into AML. Considering the 5 AML pts, 2 were diagnosed as M2 and 3 as M4. On clinical diagnosis CC showed a standard t(3,3)(q21;q26) in 5 pts, a translocation of 3p material onto band 3q26 in 2, a 3q21 deletion in 2, a complex rearrangement of band 3q26 in one, an inv(3)(q21q26) in one and a translocation involving 3p21 and 3q21 in one. FISH, carried out on cytogenetic preparation, used BAC probes obtained from Welcome Trust Sanger Institute (Cambridge, UK). The probes applied were those of the literature (Lahortiga et al, Genes Chrom & Cancer 2004; Poppe et al, Genes Chrom & Cancer 2006) and other probes covering the RPN1, EVI1, MDS1 genes. EVI1 defects had an incidence of 50%. EVI1 gene was translocated in 4 t(3;3) pts (3 RAEB-2 and one AML), amplified along with MLL in a RAEB-2 pt and deleted in the 2 AML pts with a 3q21 deletion on CC. Interestingly, no EVI1 defect was discovered in a t(3;3) RAEB-2 pt and in an inv(3)(q21q26) RCMD pt. Tri-lineage dysplasia was observed in all MDS pts independently of any EVI1 defect. Median survival of the 5 pts with either EVI1 translocation or amplification was 6 months (range 2–32), that of the 7 pts without any EVI1 defect was 26 months (range 4–40). A progression in AML occurred in all the 3 MDS pts with EVI1 defects and in one of the 4 MDS pts without any defect. A total of 8 pts, including 3 of the 4 AML progressed from MDS, were submitted to intensive chemotherapy. A complete remission (CR) was achieved in only one of the 4 pts with EVI defects and in 3 of the 4 pts without any defect. Two CR pts, one with and one without any EVI1 defect, were submitted to allogeneic bone marrow transplantation (allo-BMT). The pt with the EVI1 translocation relapsed, but succeeded in entering a second CR. In conclusion, EVI1 defects were revealed in 50% of pts, were not required for evoking the dysplastic changes associated with 3q21q26 rearrangements, were associated with a high risk of AML evolution in MDS pts, caused a short survival and resistant AML.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2007
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  • 4
    In: Blood, American Society of Hematology, Vol. 122, No. 21 ( 2013-11-15), p. 2602-2602
    Abstract: Recent evidence suggests that leukemia is not solely a cancer autonomous process, but rather a disease in which the bone marrow microenvironment, the niche, plays a crucial role too (Raaijmakers, 2011). MSCs are key component of the niche. Thus, several studies have tested whether these cells from haematological patients contain chromosomal defects identical or different from those present in leukemic cells. Based on these findings the principal aim of the present study was to evaluate whether leukemic and MSC from six AML patients shared the same cytogenetic defects after examination with three different technologies, conventional cytogenetics (CC), FISH and aCGH/SNPa. At the onset of the disease and after informed consent all the six patients were submitted to bone marrow (BM) aspiration. BM cells were submitted to CC and FISH analyses. In addition, MSC were isolated from BM cell suspension (10-15 ml) as previously described. Briefly, mononucleated cells were isolated from BM by density gradient centrifugation using Lympholyte®-H and seeded in 75 cm2 cell culture flasks at a cell density of 106 cells/cm2. Cells were cultured at 37°C, 5% CO2 in MEM-alpha medium containing 1% Penicillin/Streptomycin, 1% L-Glutamine and 10% fetal bovine serum. After 48-h adhesion, non-adherent cells were removed and culture medium replaced (Achille et al, 2011). Growth medium was changed every three days. MSCs were examined after the first passage and their phenotype was evaluated by flow cytometry. Cells were detached from culture using Tripsin-EDTA, washed twice with PBS and stained for ten minutes with the following fluorochrome-conjugated antibodies: anti-CD90-FITC, anti-CD105-PE, anti-CD14-FITC, anti-CD73-PE, anti-CD34-FITC, anti-CD80-PE, anti-CD133-APC, anti-CD31-PE and anti-CD45-APC-Alexa750. Stained cells were acquired with a Beckman Coulter Navios instrument and data analyzed with Kalooza software. The commercial FISH probes used were LSI D7S486/CEP7, LSI AMLETO from Abbot Molecular Inc. (Chicago, Il, USA) and ON c-Myc/SE8, SE10(D10Z1) from Kreatech (Amsterdam, NL). These probes were applied according to manufactures guidelines and cut-off values determined by applying a one-sided 95% confidence interval using a binomial distribution. aCGH/SNPa was carried out with the SureScan Microarray Scanner G4900DA (Agilent Technologies Inc. Santa Clara, CA). CC revealed a monosomy 7 in two patients, a del(7)(q31) in one, a trisomy 8 and a trisomy 10 in one patient each, a t(8;21)(q24,q22) translocation in the last patient. All these defects were confirmed by FISH. In order to establish whether leukemic cells and MSCs shared these same abnormalities, MSCs cultures were tested with FISH. MSC purity assessed by flow-cytometry was 50-87%. FISH revealed a normal pattern in all the cultures examined. In contrast, aCGH/SNPa revealed neither gains/losses nor LOH in four patients, a trisomy 5 in one and the LOH of a 3.8 Mb sized region located on 13q31.1 in one patient. This study, the first one that applied aCGH/SNPa to investigate the MSC chromosomal pattern, suggests that i) MSCs from chromosomally abnormal AML patients may show a normal FISH pattern, but may be either normal or contain chromosomal aberrations different from those present in leukemic cells on aCGH/SNPa analysis; ii) these defects are uncommonly seen in AML; iii) MSCs defects may flag that the leukemogenic event targets not only the hematopoietic tissue but also the stromal cell compartment, i.e. the niche; iii) aCGH/SNPa provides an in-depth view of MSC chromosomal pattern allowing the identification of potential clonal markers. Disclosures: No relevant conflicts of interest to declare.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2013
    detail.hit.zdb_id: 1468538-3
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  • 5
    In: Blood, American Society of Hematology, Vol. 118, No. 21 ( 2011-11-18), p. 1472-1472
    Abstract: Abstract 1472 Background: The chromosomal pattern is one of the most relevant parameters to make an accurate diagnosis and predict disease outcome of MDS patients. However, in about 40–50% of patients, mostly low-risk MDS, conventional cytogenetics (CC) does not reveal any defect and thus it is not informative. In this MDS subset FISH with specific probes may identify clonal defects and improve CC results. In addition, recent aCGH data suggest that these patients may present novel lesions affecting unsuspected chromosomal regions harbouring genes with a crucial role in MDS pathogenesis. Objectives: Based on these findings the principal goal of the present study was to establish whether FISH with probes specific for chromosomal regions most commonly involved in MDS along with additional probes exploring chromosomal areas which alteration has been revealed by recent aCGH studies was truly able to unmask clonal cryptic defects in chromosomally normal MDS. Additional aims were to establish whether these defects consisted in either gains/losses or balanced rearrangements, to identify the potential affected genes and to evaluate any possible influence on OS and progression free interval (PFI). Methods: The ninety-eight consecutive chromosomally normal MDS patients analysed in the present study came to our observation in the period January 2005-December 2010. They were thirty-seven females and sixty-one males, median age 64 years (range 22–77). Eighteen patients were classified as RARS, 27 as RA, one as CRMDS, 15 as RCMD, 16 as RAEB-1 and 21 as RAEB-2. Considering IPSS score, 38 patients were considered low-risk, 36 intermediate-1 risk and 18 intermediate-2 risk and 6 as high-risk. Median follow-up was 33 months (range 1–84). At the time of the study four patient have died. FISH probes were chosen based on the frequency of their involvement in MDS and their Mb position determined using UCSC genome browser on Human Mar. 2003 assembly. They were obtained from BACPAC Resources Center at C.H.O.R.I. (Oakland, USA), labelled and applied as previously described. The probes applied were the followings: RP11-912D8 (19q13.2); RP11-196P12 (17q11.2); RP11-269C4 (14q12); RP11-351O1 (10q21.3); RP11-144G6 (10q11.2); RP11-122A11 (7q34); RP11-951K18 (5q13.1); RP11-101K5 (4p14); RP11-544H14 (2q33). i-FISH cut-off values were fixed at 10%. Results: An abnormal FISH pattern was revealed in 30 patients (33.7%). A single defect was revealed in 31 patients (31.6%) and more than two defects in 8 (26.7). Twenty-two patients (22.4%) presented a single defect, whereas 9 (9.1%) more than two defects. Band 19q13.2, 14q12, 4p14, 5q13.1, 7q34, 17q11.2, 7q22, 10q11.2, 10q21.3 and 2p33 deletions had an incidence of 54.8%, 25.8%, 16.1%, 12.9%, 12.9%, 12.9%, 9.6%, 6.4% and 3.2%. The RP11-196P12 covers the RDM-1 gene which encodes for a motif found in the RAD52 protein involved in DNA double strand breaks and homologous recombination and the RP11-144G6 covers the ANXA8L1 gene over-expressed in AML. Thus, these two genes are now analysed with additional molecular tests in order to check whether they may be affected by mutations. An abnormal FISH pattern was observed in 4/18 (22.2%) RARS, in 5/27 (18.5%) RA, in 4/15 (26.6%) RCMD, in 6/16 (37.5%) RAEB-1 and in 12/21 (57.1%) RAEB-2. Considering IPSS, an abnormal FISH pattern was revealed in 7/38 (18.4%) low-risk, in 12/36 (33.3%) intermediate-1 risk, in 9/18 (50%) intermediate-2 risk and in 3/6 (50%) high-risk patients. Disease evolution occurred in a total of 21 patients (2 RARS, 5RA, 6 RAEB-1 and 7 RAEB-2), 11 (one RARS, 2 RA, 5 RAEB-1 and 2 RAEB-2) presented an abnormal FISH pattern. At least two chromosomal deletions were observed in 7/11 patients. Conclusions: i) FISH reveals novel not expected karyotype defects, mostly deletions, in about 32% of chromosomally normal MDS; ii) some deletions pinpoint genes involved in DNA repair; iii) an abnormal FISH pattern correlates with advanced and int-2, high-risk MDS; iii) the presence of more than two lesions seems to associate with an increased risk of disease progression. Disclosures: No relevant conflicts of interest to declare.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2011
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  • 6
    In: Blood, American Society of Hematology, Vol. 124, No. 21 ( 2014-12-06), p. 4543-4543
    Abstract: Imatinib (IM) is a cornerstone in the treatment of chronic myeloid leukemia (CML). Dose change or discontinuation of IM in patients who experience sustained molecular response is a subject of debate. We retrospectively studied 142 CML patients in chronic phase (Table 1) treated with IM and followed-up during 2000-2013 at our institution. Dose changes, discontinuation of therapy, cytogenetic and molecular analyses were regularly recorded during follow-up. Patients’ history was subdivided into 483 treatment time-periods at constant dosage. Response was evaluated at the end of each treatment period. We assessed whether the probability of observing a complete cytogenetic response (CCyR) or a molecular response (MR: complete, CMR or major, MMR) or a progression were influenced by treatment dose and/or duration. We applied generalized estimating equation (GEE) logistic models for the analysis of longitudinal panel data. These models are designed to account for individual patient variation due to repeated measurements during each patient’s follow-up. Out of 483 time periods at constant IM dose, 236 were followed by dose modification, 116 by IM discontinuation, 29 by a change to other treatments due to tolerability issues or non-response; 102 were still ongoing without dose changes. Treatment response: 74% of time periods resulted in a CCyR and 2.3% showed no response; 31.9% showed a CMR, 29.6% showed a MMR (MR3, MR4, MR4.5), 35.6% a suboptimal response, 2.9% no MR. CMR+MMR was observed in 61.5% time periods. Periods at standard dose showed a higher response rate, both when considering CCyR (response rate after low, standard, high dose: 69.3%, 79.6%, 68%, respectively, P=0.023) and when considering MR (CMR after low, standard, high dose: 27%, 40.5%, 15.4%, respectively, P & lt;0.001; CMR + MMR after low, standard, high dose: 53.4%, 69.8%, 52.3%, respectively, P=0.001). After adjusting for length of treatment period in a multivariate GEE model, dose lost significance and treatment duration was the only significant predictor of CCyR (P & lt;0.001). In a GEE analysis of MR accounting for treatment duration, reduction in CMR rate after periods at high dose compared with periods at standard dose remained significant (P=0.025). Treatment dose lost significance when considering CMR+MMR. In 32 patients who discontinued IM therapy for & gt;1 mos and then re-started IM, the CR rate after a period preceded by a treatment suspension was significantly higher than in other periods (CCyR: 85.7% vs. 73%, P=0.058; CMR 55.1% vs. 29.3%, P=0.001). In a GEE model with dose category, duration of treatment and previous suspension as covariates, both duration and previous suspension maintained a positive significant association to CCyR (P & lt;0.001, P=0.034, respectively), to CMR (both P & lt;0.001) and to CMR+MMR (P & lt;0.001, P=0.006, respectively). Cytogenetic progression rate at the end of a period of IM treatment was 7.1% while molecular progression rate was 12.8%. Treatment dose was not associated to progression: cytogenetic progression after low, standard, high dose: 6.1%, 6.7%, 10.5%, respectively, P=0.428; molecular progression after low, standard, high dose: 14.8%, 11.3%, 13%, respectively, P=0.584. In a multivariate GEE analysis, neither dose nor duration of treatment predicted progression. After adding type of previous treatment (IM, other drug, no treatment) as a covariate, treatment periods preceded by at least 1 month of discontinuation had a significantly lower molecular progression rate (P=0.011). The possibility of varying dosage is often considered in “real-life” patient clinical management. In our study, 62% of time periods were followed by a dose change, but this did not affect response and progression rate after accounting for length of treatment period. The prompt response to resumed IM therapy suggests that patients may be candidates for intermittent therapy. Future studies could use the same statistical model to pick up individual patient variation in longitudinal data collected over time, including trials at reduced IM dose or of “on-off” therapy or on new TKI. Table 1. Patients’ characteristic Variable Description N. of patients 142 Sex M/F 58%/42% Age at diagnosis (years), median (range) 52 (18-78) N. of IM treatment periods 483 IM dosage, N (%) Low dose (100-300 mg/day) 163 (34%) Standard dose (400 mg/day) 242 (50%) High dose (450-800 mg/day) 78 (16%) Duration of IM at constant dosage (days), median (range) 258 (7-4526) Disclosures No relevant conflicts of interest to declare.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2014
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  • 7
    In: Blood, American Society of Hematology, Vol. 116, No. 21 ( 2010-11-19), p. 2411-2411
    Abstract: Abstract 2411 In B-CLL the precise definition of the chromosomal pattern has always been a very difficult goal as leukemic cells poorly respond to the traditionally used set of mitogens. Thus, conventional cytogenetic studies (CC) have always been replaced by interphase FISH (iFISH) analyses. However, recent studies have demonstrated that the CpG oligonucleotide plus interleukin-2 (ODN+IL-2) stimulation can effectively increase the detection rate of chromosomal abnormalities by inducing metaphase spreads from B-CLL leukemic cells. Based on these data, we decided to compare the results obtained by the ODN+IL2 combination, the pokeweed mitogen (PKWM) stimulation and iFISH in ninety-one B-CLL patients diagnosed at our Institution between January 2007 and July 2010. In addition, we evaluated any possible correlation with other prognostic markers and clinical parameters. There were thirty-eight females and fifty-three males with a median age of 64 years (range 42–83). According to Binet, sixty-three patients (69.2%) were considered as stage A, seventeen (18.7%) as stage B and eleven (12.1%) as stage C. PKWM did not provide any mitotic figure in thirteen patients (14.2%) and detected clonal defects in sixteen patients (17.5%). In contrast, the ODN+IL-2 combination was unable to provide metaphase spreads in three patients only (3.3%) and revealed clonal abnormalities in fifty-six patients (61.5%). In eight patients both cultures revealed an equal percentage of cells carrying the same abnormality. In addition, the ODN+IL-2 combination revealed a complex karyotype (≥ three defects) in twelve patients (13.2%), two chromosomal defects in fourteen patients (15.4%)(including five with band 17p13 rearrangement and three with band 11q13 rearrangement) and a single chromosomal defect in thirty patients (32.9%). Fifteen patients harboured various chromosomal rearrangements (16.4%). iFISH was carried out with the B-CLL FISH probe panel (Vysis, Downers Grove, IL, USA) and revealed clonal abnormalities in sixty-two patients (68.1%). The most common defects were: 13q-, +12, 11q- and 17p- having an incidence of 46.1%, 14.2%, 7.7% and 6.5%. Three patients with a normal FISH pattern presented a +12 when analysed with the ODN+IL-2 combination and five, who showed the loss of one p53 signal on iFISH, presented a structural 17p13 defect when investigated with the ODN+IL2 combination. In addition, considering the forty-two patients who harboured a 13q- on iFISH analyses, the ODN+IL2 combination revealed that in five patients this defect was included in a complex karyotype. From a clinical point of view, considering the fifteen patients with various chromosomal rearrangements nine were classified as stage A, four as stage B and two as stage C and considering the twelve patients with a complex karyotype three were considered as stage B and nine as stage C. In conclusion, the ODN+IL2 combination i) allows a precise definition of the chromosomal pattern in B-CLL patients and in our series identified clonal defects in 61% of patients; ii) reveals minor +12 clonal cell populations which may evade iFISH identification; iii) does not always identify a 13q deletion because of the sub-microscopic nature of this chromosomal defect; iv) reveals that the loss of one p53 signal on iFISH analyses is frequently due to an unbalanced rearrangement; iv) is the only technique which allows the identification of complex karyotypes and/or chromosomal translocations both associated with an advanced Binet stage. Thus, the ODN+IL2 combination should be used in conjunction with iFISH to achieve a more accurate karyotype definition in B-CLL patients. Disclosures: No relevant conflicts of interest to declare.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2010
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  • 8
    In: Blood, American Society of Hematology, Vol. 108, No. 11 ( 2006-11-16), p. 4413-4413
    Abstract: Conventional cytogenetics (CC) discovers clonal chromosomal defects in about 40–80% of de novo MDS/AML. However, due to the poor quality of metaphases, CC is often unable to reveal cryptic defects, precisely define chromosomal breakpoints and establish the nature of marker chromosomes. All these drawbacks may be overcome by FISH, a powerful technique with high sensitivity and specificity. Abnormalities of chromosome 11 long arm and of band 11p15 are seen in 5–7% and in 0.5% of de novo MDS/AML. Herein we report two patients diagnosed as AML evolved from MDS. On CC the karyotype of the first patient was 47,XX,+3,t(15;20)(q15;p11),add(11)(p15) [20] [case 1] and that of the second patient was 45,XX,t(1;?)(q12;?),−5,−7,+8,add(11)(q23),add(12)(p13),add(17)(p13),add(21)(q22) [7]/46,XX,t(1;?)(q12;?),add(5)(q11),−7,+8,add(17)(p13),add(21)(q22) [8] [case 2]. In both the patients FISH was performed with commercial probes (LSI and TCP from Vysis and QBiogene, applied following manufacturer’s guidelines) and Bacterial Artificial Chromosome (BAC) probes (kindly provided by the Wellcome Trust Sanger Institute, Cambridge UK) in order to better define chromosome 11 rearrangements. The BAC probes were cultured in LB broth for a night and the following day the DNA was extracted after lysis. Labelling with biotin and digoxigenin was carried out by nick translation reaction. Signal detection was obtained by fluorescein avidin and anti-digoxigenin. Case one was at first investigated with a BAC probe specific for the NUP98 gene, mapped at 11p15. One signal was expected on the normal chromosome 11 and a split signal on add(11)(p15). Instead, two spots on the short arm and the other on the long arm of a marker chromosome were seen. The investigation with the Cyclin D1/CEP11 probe, mapped at 11q13.3, allowed us to establish that this marker was a number 11 and, at the same time to identify the other chromosome 11, which did not show any signal corresponding to NUP98. This same chromosome showed two signals corresponding to MLL and two other signals corresponding to ATM when these probes were applied. A TCP 11 probe did not identify any other chromosome 11 fragment. Therefore, we realized that chromosomes 11 were rearranged with each others. Additional BAC probes lead us to fix the possible breakpoint area on the chromosome 11 rearranged in the long arm in between bands q21 and q13 and on the other chromosome 11 under the NUP98 gene. Case two was at first investigated with TCP 1 and 11 probes that showed chromosome 11 material on the rearranged chromosome 1 and a fragment of chromosome 1 inserted in the middle of chromosome 11 long arm, which was not totally painted by the two probes. This datum lead us to hypothesize the involvement of a third chromosome in the rearrangement. A TCP 5 probe demonstrated that the unpainted material under der(11) belong to chromosome 5. When MLL and ATM probes were applied the former was on der(1) and the second was on der(11), under the inserted chromosome 1 fragment, but over chromosome 5 material. Therefore, the breakpoint region between der(11) and chromosome 5 material lies in between band 11q22 and 11q23. In conclusion, FISH: reveals unexpected rearrangements absolutely cryptic on CC, is a very effective tool to map chromosome breakpoints and identifies new genes involved in leukemogenesis.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2006
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  • 9
    In: Blood, American Society of Hematology, Vol. 108, No. 11 ( 2006-11-16), p. 4933-4933
    Abstract: Different studies with conventional cytogenetics have shown that the chromosome pattern of B-CLL patients remains rather stable during disease outcome. In contrast, other reports have demonstrated that karyotypic evolution occurs in about 15% of patients, especially in those experiencing disease evolution. The aim of the present study was to evaluate the incidence of chromosome evolution in 32 B-CLL patients and to establish whether the development of additional genetic lesions correlates with clinical progression. The 32 patients entered in the study were part of a larger group of patients (253 consecutive) observed in the period January 2002–December 2005. FISH was performed on bone marrow cells in all the 32 patients on clinical diagnosis and during the follow-up, whereas CC was carried out at the onset of the disease in 7 patients and during the follow-up in only 5 patients. From a clinical point of view, these 32 patients were 11 females and 21 males with a median age of 55 years (range 36–71). On clinical diagnosis 18 were classified as stage A, 11 as stage B and 3 as stage C. Median follow-up time from clinical diagnosis was 33.5 months (range 6–88). Nineteen patients presented a stable clinical course, whereas 13 experienced disease progression after a median follow-up of 21.5 months (range 5–83). Considering these last patients, 5 progressed in stage B, 5 in stage C and 3 in Richter’s syndrome (RS). All the 32 patients were investigated with the B-CLL probe set (α12/13q14/13q34 and p53/ATM probes from Vysis) which was applied according to manufacturer’s guidelines. The cut-off value for each probe was determined by adding three times the standard deviation to the mean percentage of cells with an abnormal pattern obtained from five normal controls. A clonal p53 deletion was considered to be present if discovered in more than 20% cells. On clinical diagnosis FISH detected a normal pattern in 12 patients, a trisomy 12 in 7 and a mono-allelic loss of the D13S319 locus in 13; CC discovered a trisomy 12 in 2/7 patients. On FISH investigation only one of the 19 patients with a stable disease developed a new genetic lesion (a mono-allelic loss of the D13S319 locus). In contrast, 7/13 patients with disease progression revealed additional genetic defects. On diagnosis one of them had presented a trisomy 12 and the remaining 6 a normal FISH pattern. On clinical evolution the patient with trisomy 12 maintained three signal corresponding to α12, but developed additional defects revealed by CC; among the other 6 chromosomally normal patients one developed a bi-allelic loss of both the D13S319 loci, 3 a deletion of the ATM gene and 2 a deletion of the p53 locus in 64% and 54% cells. CC, performed in 4 of these chromosomally normal patients, revealed a normal pattern in 3 patients (one stage B disease and 2 RS) and a del(11)(q13) in the other whom showed a deletion of one ATM locus also on FISH investigation. Therefore, none of the two patients with RS developed any defects typically associated with such a disease evolution. In conclusion, our study shows that further genetic lesions may develop during disease outcome in 25% of B-CLL patients, are associated with disease evolution, frequently target the ATM and the p53 loci. In addition, in our opinion CC still has a crucial role in every B-CLL patient experiencing disease evolution since it provides information on chromosomal regions not investigated by the FISH panel probe set.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2006
    detail.hit.zdb_id: 1468538-3
    detail.hit.zdb_id: 80069-7
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  • 10
    In: Cancer, Wiley, Vol. 69, No. 8 ( 1992-04-15), p. 2131-2142
    Type of Medium: Online Resource
    ISSN: 0008-543X , 1097-0142
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 1992
    detail.hit.zdb_id: 1479932-7
    detail.hit.zdb_id: 2599218-1
    detail.hit.zdb_id: 2594979-2
    detail.hit.zdb_id: 1429-1
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