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  • 1
    UID:
    (DE-603)48615856X
    Format: 1 Online-Ressource
    Content: Abstract: All vertebrate blood cells descend from multipotent hematopoietic stem cells (HSCs), whose activity and differentiation depend on a complex and incompletely understood relationship with inflammatory signals. Although homeostatic levels of inflammatory signaling play an intricate role in HSC maintenance, activation, proliferation, and differentiation, acute or chronic exposure to inflammation can have deleterious effects on HSC function and self-renewal capacity, and bias their differentiation program. Increased levels of inflammatory signaling are observed during aging, affecting HSCs either directly or indirectly via the bone marrow niche and contributing to their loss of self-renewal capacity, diminished overall functionality, and myeloid differentiation skewing. These changes can have significant pathological consequences. Here, we provide an overview of the current literature on the complex interplay between HSCs and inflammatory signaling, and how this relationship contributes to age-related phenotypes. Understanding the mechanisms and outcomes of this interaction during different life stages will have significant implications in the modulation and restoration of the hematopoietic system in human disease, recovery from cancer and chemotherapeutic treatments, stem cell transplantation, and aging
    Note: Cells. - 10, 6 (2021) , 1386, ISSN: 2073-4409
    Language: English
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  • 2
    UID:
    (DE-101)1240609736
    Format: Online-Ressource
    Content: Abstract: All vertebrate blood cells descend from multipotent hematopoietic stem cells (HSCs), whose activity and differentiation depend on a complex and incompletely understood relationship with inflammatory signals. Although homeostatic levels of inflammatory signaling play an intricate role in HSC maintenance, activation, proliferation, and differentiation, acute or chronic exposure to inflammation can have deleterious effects on HSC function and self-renewal capacity, and bias their differentiation program. Increased levels of inflammatory signaling are observed during aging, affecting HSCs either directly or indirectly via the bone marrow niche and contributing to their loss of self-renewal capacity, diminished overall functionality, and myeloid differentiation skewing. These changes can have significant pathological consequences. Here, we provide an overview of the current literature on the complex interplay between HSCs and inflammatory signaling, and how this relationship contributes to age-related phenotypes. Understanding the mechanisms and outcomes of this interaction during different life stages will have significant implications in the modulation and restoration of the hematopoietic system in human disease, recovery from cancer and chemotherapeutic treatments, stem cell transplantation, and aging
    Note: Cells. - 10, 6 (2021) , 1386, ISSN: 2073-4409
    Language: English
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  • 3
    Online Resource
    Online Resource
    Basel : MDPI AG | Freiburg : Albert-Ludwigs-Universität Freiburg
    UID:
    (DE-627)1876731982
    Format: 1 Online-Ressource (15 Seiten) , Illustrationen, Diagramme
    ISSN: 2073-4409
    In: Cells, 10, 6 (2021), 1386, 2073-4409
    Language: English
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  • 4
    UID:
    (DE-603)485424193
    Format: 1 Online-Ressource
    Content: Abstract: In steady state conditions Hematopoietic stem cells (HSCs) are kept in a dormant state, but can be rapidly activated and mobilized in response to stress. Here, we identified the viral RNA immune receptor MDA5 as a critical regulator of HSC activation. MDA5 belongs to the RIG-I like receptor (RLR) family. We proved that Mda5 and other RLRs are expressed, at low levels, in hematopoietic precursor cell lines, but their expression is rapidly increased upon challenge such as irradiation. These data provided the first hint that RLRs play roles even in the absence of infection. In order to investigate the role of Mda5 in the hematopoietic system we used an Mda5 knockout mouse. Mda5-/- HSCs showed higher colony forming capacity in vitro and increased repopulating capacity in vivo as shown by serial CFU-C replating assays and serial transplantation experiments, respectively. Additionally, challenges such as serial irradiation or injection of the myeloablative drug 5-fluoruracil (5-FU) led to accumulation of Mda5-/- HSCs whereas their WT counterparts were exhausted. Since the quiescent status of HSCs plays a significant role in their ability to overcome challenges we reasoned that the enhanced repopulation activity of Mda5-/- HSCs may be due to their ability to retain their quiescence. Indeed, we found that Mda5-/- HSCs are remarkably more quiescent than WT HSCs at both steady-state and after chemotherapy. In addition, inhibition of TBK1, an important kinase downstream of Mda5, preserved quiescence and increased the colony forming potential of WT HSCs, thus mimicking the Mda5-/- HSC phenotype. These data suggest that MDA5 is important to control the balance between quiescence and proliferation in HSCs. To determine how MDA5 regulates HSC activation, we performed RNA-sequencing and observed that Mda5-/- HSCs show an impaired upregulation of the inflammatory response typically observed in control animals after chemotherapy. Surprisingly, our RNAseq data revealed increased transcription of transposable elements (TEs) during hematopoietic regeneration. This observation prompted us to examine whether TEs can act as potential ligands for MDA5. Indeed, by establishing a protocol for RNA immunoprecipitation after crosslinking (FLASH protocol) in our lab, we were able to prove that MDA5 is able to bind TEs such as LINEs and SINEs upon challenge. 〈br〉This work reveals that during stress like chemotherapy, TE elements are upregulated and can bind and activate the innate immune receptor MDA5. Activation of MDA5 leads to the induction of an inflammatory response that is necessary for HSC activation
    Note: Dissertation Universität Freiburg 2019
    Language: English
    Keywords: Hochschulschrift
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  • 5
    UID:
    (DE-101)1238517226
    Format: Online-Ressource
    Content: Abstract: In steady state conditions Hematopoietic stem cells (HSCs) are kept in a dormant state, but can be rapidly activated and mobilized in response to stress. Here, we identified the viral RNA immune receptor MDA5 as a critical regulator of HSC activation. MDA5 belongs to the RIG-I like receptor (RLR) family. We proved that Mda5 and other RLRs are expressed, at low levels, in hematopoietic precursor cell lines, but their expression is rapidly increased upon challenge such as irradiation. These data provided the first hint that RLRs play roles even in the absence of infection. In order to investigate the role of Mda5 in the hematopoietic system we used an Mda5 knockout mouse. Mda5-/- HSCs showed higher colony forming capacity in vitro and increased repopulating capacity in vivo as shown by serial CFU-C replating assays and serial transplantation experiments, respectively. Additionally, challenges such as serial irradiation or injection of the myeloablative drug 5-fluoruracil (5-FU) led to accumulation of Mda5-/- HSCs whereas their WT counterparts were exhausted. Since the quiescent status of HSCs plays a significant role in their ability to overcome challenges we reasoned that the enhanced repopulation activity of Mda5-/- HSCs may be due to their ability to retain their quiescence. Indeed, we found that Mda5-/- HSCs are remarkably more quiescent than WT HSCs at both steady-state and after chemotherapy. In addition, inhibition of TBK1, an important kinase downstream of Mda5, preserved quiescence and increased the colony forming potential of WT HSCs, thus mimicking the Mda5-/- HSC phenotype. These data suggest that MDA5 is important to control the balance between quiescence and proliferation in HSCs. To determine how MDA5 regulates HSC activation, we performed RNA-sequencing and observed that Mda5-/- HSCs show an impaired upregulation of the inflammatory response typically observed in control animals after chemotherapy. Surprisingly, our RNAseq data revealed increased transcription of transposable elements (TEs) during hematopoietic regeneration. This observation prompted us to examine whether TEs can act as potential ligands for MDA5. Indeed, by establishing a protocol for RNA immunoprecipitation after crosslinking (FLASH protocol) in our lab, we were able to prove that MDA5 is able to bind TEs such as LINEs and SINEs upon challenge. 〈br〉This work reveals that during stress like chemotherapy, TE elements are upregulated and can bind and activate the innate immune receptor MDA5. Activation of MDA5 leads to the induction of an inflammatory response that is necessary for HSC activation
    Note: Dissertation Universität Freiburg 2019
    Language: English
    Library Location Call Number Volume/Issue/Year Availability
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  • 6
    UID:
    (DE-603)47026716X
    Format: Online-Ressource
    Content: Abstract: Immunodeficiencies are typically caused by loss-of-function mutations in lymphocyte-specific genes. Occasionally, mutations in ubiquitous general-purpose factors, including those affecting essential components of the DNA polymerase epsilon (POLE) holoenzyme, have cell-type-specific consequences. POLE3, one of the four components of the POLE holoenzyme, features a histone fold domain and a unique acidic C terminus, making it a particularly attractive candidate mediating cell type-specific activities of POLE. Mice lacking Pole3 survive up to late embryonic stages, indicating that this subunit is dispensable for DNA replication. The phenotypes of viable hypomorphic and neomorphic alleles are surprisingly tissue restricted and reveal a stage-specific function of the histone fold domain of Pole3 during T and B cell development. Gradual introduction of positively charged residues into the acidic C terminus leads to peripheral lymphopenia of increasing severity. Our findings serve as a paradigm to understand the molecular basis of cell-type-specific non-replicative functions of the ubiquitous POLE complex
    Note: Cell reports , 31, 11 (2020) , 107756, ISSN: 2211-1247
    Language: English
    Keywords: Hochschulschrift
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  • 7
    UID:
    (DE-603)490516254
    Format: 1 Online-Ressource
    Content: Abstract: Upregulation of the non-clustered homeobox transcription factor HLX (H2.0-like Homeobox) is frequently observed in patients with acute myeloid leukemia. Since developmental pathways are often reactivated in cancer, we asked whether hlx1 plays a role during haematopoietic development and blood cell differentiation in zebrafish. During the transient wave of haematopoiesis, hlx1 knock-down leads to diminished numbers of erythrocytes and increased numbers of myeloid cells. From RNA-seq analysis of sorted control or hlx1 morphant endothelial cells we could see that many erythroid genes were downregulated upon hlx1 knock-down. Indeed, ChIP-seq analysis of human blood cell lines confirmed that HLX binds to the regulatory region of one of the main regulators of erythropoiesis, namely SCL, suggesting that Hlx1 genetically participates in maintaining a balance between erythroid and myeloid cells during the transient wave of haematopoiesis in zebrafish.〈br〉As for the definitive wave of haematopoiesis, tissue specific overexpression of human HLX leads to aberrant production of hematopoietic stem and progenitor cells (HSPCs) and increased numbers of immature myeloid cells at 48 hours post fertilization. On the other hand, hlx1 morphants have diminished numbers of definitive HSPCs, which can be rescued by means if overexpression of the human ortholog. Edu-labelling of endothelial cells, the precursors of HSPCs, from overexpressing or morphant fish showed hyper- or hypo-proliferation of these cells, respectively. To delve into the molecular mechanism of HLX, we used to the expression analysis of sorted endothelial cells from zebrafish that overexpress HLX in endothelial cells and hlx1 morphants. We found that overexpression of HLX leads to mitochondrial dysfunction and downregulation of oxidative phosphorylation. On the other hand, down-regulation of hlx1 nicely corroborated the overexpression data showing the opposite results. ATAC-seq performed on hlx1 morphant endothelial cells confirmed chromatin accessibility changes of mitochondrial electron transport chain genes and ppard genes, which are important for lipid metabolism and fatty acid oxidation.〈br〉Firstly, we verified our zebrafish HSPC phenotype in human cells, by performing a Colony Forming Unit assays (CFU) in primary CD34+ progenitor hematopoietic cells. Indeed, overexpression of HLX results in an increased number of colonies, whereas down regulation greatly compromises the ability of CD34+ cells to form colonies. To further verify our results, we assesed metabolism both in zebrafish and in CD34+ cells. Seahorse metabolic assays revealed that overexpression of HLX reduces the oxidative phosphorylation capacity in both systems. Moreover, HLX overexpression leads to decreased mitochondrial potential, as detected by TMRM staining, which suggests that HLX can regulate the HSPC metabolic state. From ChIP-seq in HLX overexpressing blood cell lines, we figured that HLX directly regulates metabolic genes by binding to regulatory regions of mitochondrial genes (e.g., NDUFS4, OPA1, and SDHC), as well as PPARδ.〈br〉Finally, experiments showed that zebrafish hlx1 morphant treatment with a PPARδ agonist can rescue the HSPC phenotype, while treatment with an antagonist can rescue the immature myeloid phenotype in HLX overexpressing fish. These results were recapitulated in CD34+ cells. In summary, our findings establish HLX as a novel regulator of metabolism in haematopoietic stem cells
    Note: Dissertation Universität Freiburg 2018
    Language: English
    Keywords: Hochschulschrift
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  • 8
    UID:
    (DE-627)1736715895
    Format: 1 Online-Ressource (20 Seiten) , Illustrationen, Diagramme , Supplemental information (2 Dateien)
    ISSN: 2211-1247
    In: Cell reports, 31, 11 (2020), 107756, 2211-1247
    Language: English
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  • 9
    UID:
    (DE-602)edoccha_9960407972302883
    Format: 1 electronic resource (142 p.)
    Content: In the past decade, a small tropical vertebrate fish, zebrafish, has rapidly gained the interest of research laboratories worldwide as a model system. This topic will provide updated perspectives on all fields of zebrafish research from experts gathering at the 5th Zebrafish Principal Investigators Meeting in Trento, 20-23 March 2018. The community of researchers using zebrafish is rapidly expanding, necessitating a clear plan for how to tackle central questions that remain a challenge in the field and providing inspiration for future studies. This is the aim of the workshop and the Frontiers Research Topic will provide a platform for dissemination of novel ideas arising from this meeting.
    Note: English
    Additional Edition: ISBN 2-88963-669-0
    Language: English
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  • 10
    UID:
    (DE-603)48985690X
    Format: 1 Online-Ressource (142 p.)
    ISBN: 9782889636693 , 9782889636693
    Content: In the past decade, a small tropical vertebrate fish, zebrafish, has rapidly gained the interest of research laboratories worldwide as a model system. This topic will provide updated perspectives on all fields of zebrafish research from experts gathering at the 5th Zebrafish Principal Investigators Meeting in Trento, 20-23 March 2018. The community of researchers using zebrafish is rapidly expanding, necessitating a clear plan for how to tackle central questions that remain a challenge in the field and providing inspiration for future studies. This is the aim of the workshop and the Frontiers Research Topic will provide a platform for dissemination of novel ideas arising from this meeting.
    Language: English
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