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  • 2018  (5)
  • Vogel, H.-J.  (5)
  • Vogel, Hans-Jörg  (5)
  • Soils
Type of Medium
  • 2018  (5)
  • 1
    Language: English
    In: Frontiers in Environmental Science, 01 April 2018, Vol.6
    Description: Soil-borne nitrous oxide (N2O) emissions have a high spatial and temporal variability which is commonly attributed to the occurrence of hotspots and hot moments for microbial activity in aggregated soil. Yet there is only limited information about the biophysical processes that regulate the production and consumption of N2O on microscopic scales in undisturbed soil. In this study, we introduce an experimental framework relying on simplified porous media that circumvents some of the complexities occuring in natural soils while fully accounting for physical constraints believed to control microbial activity in general and denitrification in particular. We used this framework to explore the impact of aggregate size and external oxygen concentration on the kinetics of O2 consumption, as well as CO2 and N2O production. Model aggregates of different sizes (3.5 vs. 7 mm diameter) composed of porous, sintered glass were saturated with a defined growth medium containing roughly 109 cells ml−1 of the facultative anaerobic, nosZ-deficient denitrifier Agrobacterium tumefaciens with N2O as final denitrification product and incubated at five different oxygen levels (0–13 vol-%). We demonstrate that the onset of denitrification depends on the amount of external oxygen and the size of aggregates. Smaller aggregates were better supplied with oxygen due to a larger surface-to-volume ratio, which resulted in faster growth and an earlier onset of denitrification. In larger aggregates, the onset of denitrification was more gradual, but with comparably higher N2O production rates once the anoxic aggregate centers were fully developed. The normalized electron flow from the reduced carbon substrate to N-oxyanions (edenit-/etotal- ratio) could be solely described as a function of initial oxygen concentration in the headspace with a simple, hyperbolic model, for which the two empirical parameters changed with aggregate size in a consistent way. These findings confirm the important role of soil structure on N2O emissions from denitrification by shaping the spatial patterns of microbial activity and anoxia in aggregated soil. Our dataset may serve as a benchmark for constraining or validating spatially explicit, biophysical models of denitrification in aggregated soil.
    Keywords: Greenhouse Gas Emissions ; Denitrification Kinetics ; Microbial Hotspots ; Microsites ; Anoxic Aggregate Centers ; Agrobacterium Tumefaciens ; Environmental Sciences
    E-ISSN: 2296-665X
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  • 2
    In: Ecohydrology, September 2018, Vol.11(6), pp.n/a-n/a
    Description: By applying the newly developed flow cell (FC) concept, this study investigated the impact of small‐scale spatial variations (millimetre to centimetre) in organic matter (OM) composition (diffusive reflectance infrared Fourier transform spectroscopy), biological activity (zymography), and wettability (contact angle [CA]) on transport processes (tracer experiments, radiography). Experiments were conducted in five undisturbed soil slices (millimetre apart), consisting of a sandy matrix with an embedded loamy band. In the loamy band increased enzyme activities and OM (10 mm apart) were found compared with the sand matrix, with no interrelations although spatial autocorrelation ranges were up to 7 cm. CAs were increased (0–110°) above the loamy band and were negatively correlated with acid phosphatase. Missing correlations were probably attributed to texture variations between soil slices. A general correlation between CA and C content (bulk) were confirmed. Variability in texture and hydraulic properties led to the formation of heterogeneous flow patterns and probably to heterogeneously distributed interfacial properties. The new FC concept allows process evaluation on the millimetre scale to analyse spatial relations, that is, between small‐scale textural changes on transport processes and biological responses. The concept has been proved as a versatile tool to analyse spatial distribution of biological and interfacial soil properties in conjunction with the analysis of complex micro‐hydraulic processes for undisturbed soil samples. The concept may be improved by additional nondestructive imaging methods, which is especially challenging for the detection of small‐scale textural changes.
    Keywords: Drift Spectroscopy ; Extracellular Enzyme Activity ; Flow Cell ; Soil Water Repellency ; Transport Processes ; Undisturbed Soil ; X‐Ray Radiography
    ISSN: 1936-0584
    E-ISSN: 1936-0592
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  • 3
    In: Land Degradation & Development, September 2018, Vol.29(9), pp.3112-3126
    Description: Bioeconomy strategies have been adopted in many countries around the world. Their sustainable implementation requires a management of soils that maintains soil functions and avoids land degradation. Only then, ecosystem services can be maintained and resources used efficiently. We present an analytical framework for impact assessment that links policy and technology driving forces for soil management decisions to soil processes, soil functional changes, and their impacts on ecosystem services and resource use efficiency, both being targets that have been set by society and are anchored in bioeconomy policy strategies and sustainable development goals. Although the resource use efficiency concept has a long‐term tradition, most studies of agricultural management do not address the role of soils in their efficiency assessment. The concept of ecosystem services has received increasing attention over the last years; however, its link to soil functions and soil management practices is still not well established. This study is the first to conceptually link the socioeconomic processes of external drivers for soil management with the natural processes of soil functions and connect them back to impacts on the social system. Application of the framework helps strengthen the science‐policy interface and to systemically assess and compare the opportunities and threats of soil management practices from the perspective of goals set by society at different spatial and temporal scales. Insights gained in this way can be applied in stakeholder decision‐making processes and used to inform the design of governance instruments aimed at sustainable soil management within a bioeconomy.
    Keywords: Bioeconomy ; Ecosystem Services ; Impact Assessment ; Resource Use Efficiency ; Soil Management Practices ; Sustainable Development Goals
    ISSN: 1085-3278
    E-ISSN: 1099-145X
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  • 4
    Language: English
    In: Geoderma, 01 September 2018, Vol.325, pp.37-48
    Description: Organic particles including microorganisms are a significant fraction of the mobile organic matter (MOM) pool that contributes to initial pedogenesis. Still, the dynamics and the interplay of the multitude of processes that control the mobilization, transport, and retention of MOM are vastly unclear. We studied this interplay using an ‘artificial soil’ as model for a young, unstructured soil with defined initial composition employing a novel two-layer column experiment. The upstream layer was composed of a mixture of well-defined mineral phases, a sterile organic matter source and a diverse, natural microbial inoculant mimicking an organic-rich topsoil. The downstream layer, mimicking the subsoil, was composed of the mineral phases, only. Columns were run under water-unsaturated flow conditions with multiple flow interruptions to reflect natural flow regimes and to detect possible non-equilibrium processes. Pore system changes caused by flow were inspected by scanning electron microscopy and computed micro-tomography. MOM-related physicochemical effluent parameters and bacterial community diversity and abundance were assessed by molecular analysis of the effluent and the solid phase obtained after the long-term irrigation experiment (75 d). Tomographic data showed homogeneous packing of the fine-grained media (sandy loam). During flow, the initially single-grain structured artificial soil showed no connected macropores. In total, 6% of the initial top layer organic matter was mobile. The release and transport of particulate (1.2%) and dissolved organic matter (4.8%) including bacteria were controlled by non-equilibrium conditions. Bacterial cells were released and selectively transported to downstream layer resulting in a depth-dependent and selective establishment of bacterial communities in the previously sterile artificial soil. This study underlines the importance of bacterial transport from the surface or topsoil for colonization and maturation of downstream compartments. This initial colonization of pristine surfaces is the major step in forming biogeochemical interfaces - the prominent locations of intensive biological activity and element turnover that seem to play a major role for the functioning of soil.
    Keywords: Mobile Organic Matter ; Unsaturated Two-Layer Column Experiment ; Experimental Pedogenesis ; Artificial Soil ; Computed Micro-Tomography ; Molecular Analysis ; Agriculture
    ISSN: 0016-7061
    E-ISSN: 1872-6259
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  • 5
    Language: English
    In: SOIL, 2018, Vol.4(1), pp.83-92
    Description: The central importance of soil for the functioning of terrestrial systems is increasingly recognized. Critically relevant for water quality, climate control, nutrient cycling and biodiversity, soil provides more functions than just the basis for agricultural production. Nowadays, soil is increasingly under pressure as a limited resource for the production of food, energy and raw materials. This has led to an increasing demand for concepts assessing soil functions so that they can be adequately considered in decision-making aimed at sustainable soil management. The various soil science disciplines have progressively developed highly sophisticated methods to explore the multitude of physical, chemical and biological processes in soil. It is not obvious, however, how the steadily improving insight into soil processes may contribute to the evaluation of soil functions. Here, we present to a new systemic modeling framework that allows for a consistent coupling between reductionist yet observable indicators for soil functions with detailed process understanding. It is based on the mechanistic relationships between soil functional attributes, each explained by a network of interacting processes as derived from scientific evidence. The non-linear character of these interactions produces stability and resilience of soil with respect to functional characteristics. We anticipate that this new conceptional framework will integrate the various soil science disciplines and help identify important future research questions at the interface between disciplines. It allows the overwhelming complexity of soil systems to be adequately coped with and paves the way for steadily improving our capability to assess soil functions based on scientific understanding.
    Keywords: Soil Stability ; Evaluation ; Agricultural Production ; Modelling ; Agricultural Management ; Biodiversity ; Soil Stability ; Food Production ; Water Quality ; Raw Materials ; Biological Activity ; Decision Making ; Soil Improvement ; Soil Science ; Terrestrial Environments ; Interactions ; Water Quality ; Soil Management ; Modelling ; Raw Materials ; Raw Materials ; Soil Sciences ; Water Quality ; Soils ; Framework ; Stability ; Nutrient Cycles ; Mathematical Models ; Agricultural Production ; Biodiversity ; Nutrients (Mineral) ; Soils ; Decision Making ; Water Quality ; Biodiversity ; Biodiversity;
    E-ISSN: 2199-398X
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