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A ZmGDB transcript view context page associated with the genomic region depicted in Figure 1

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posted on 2011-12-31, 03:35 authored by Shannon D Schlueter, Matthew D Wilkerson, Qunfeng Dong, Volker Brendel

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Taken from "xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features"

Genome Biology 2006;7(11):R111-R111.

Published online 20 Nov 2006

PMCID:PMC1794590.

The feature graphic in the top window pane is described in Figure 1. Information at the top and left of this pane is displayed when passing the cursor over feature elements. Currently displayed is the information associated with the sixth intron (immediately left of the green viewfinder) of the GeneSeqer spliced alignment of a cDNA sequence (accession , GenBank id 21213129). The vertical green bars represent the view finder for the sequence view found in the bottom window pane. Red nucleotides shown in this view represent alignment mismatches with the genomic sequence.

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