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  • UB Potsdam  (6)
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  • Heinrich-Mann-Bibl. Strausberg
  • Haus Wannsee-Konferenz
  • Kammergericht
  • SKB Bad Freienwalde
  • Barciszewski, Jan  (6)
  • Biologie  (6)
  • Aufsatzsammlung  (6)
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  • 1
    Online-Ressource
    Online-Ressource
    Cham : Springer International Publishing | Cham : Springer
    UID:
    b3kat_BV046137619
    Umfang: xi, 624 Seiten , Illustrationen, Diagramme
    Ausgabe: 1st ed. 2019
    ISBN: 9783030147914 , 9783030147921
    Serie: RNA Technologies
    Weitere Ausg.: Erscheint auch als Online-Ausgabe ISBN 978-3-030-14792-1
    Weitere Ausg.: Erscheint auch als Druck-Ausgabe ISBN 978-3-030-14791-4
    Weitere Ausg.: Erscheint auch als Druck-Ausgabe ISBN 978-3-030-14793-8
    Weitere Ausg.: Erscheint auch als Druck-Ausgabe ISBN 978-3-030-14794-5
    Sprache: Englisch
    Fachgebiete: Biologie
    RVK:
    RVK:
    Schlagwort(e): DNS ; Methylierung ; RNS ; Histone ; Methylierung ; Aufsatzsammlung
    URL: Volltext  (URL des Erstveröffentlichers)
    URL: Cover
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  • 2
    Online-Ressource
    Online-Ressource
    Berlin, Heidelberg : Springer Berlin Heidelberg
    UID:
    gbv_1656308118
    Umfang: Online-Ressource (XI, 599 p. 231 illus., 84 illus. in color, online resource)
    ISBN: 9783642544521
    Serie: RNA Technologies
    Inhalt: This volume contains 29 engrossing chapters contributed by worldwide, leading research groups in the field of chemical biology. Topics include pre-biology; the establishment of the genetic code; isomerization of RNA; damage of nucleobases in RNA; the dynamic structure of nucleic acids and their analogs in DNA replication, extra- and intra-cellular transport; molecular crowding by the use of ionic liquids; new technologies enabling the modification of gene expression via editing of therapeutic genes; the use of riboswitches; the modification of mRNA cap regions; new approaches to detect appropriately modified RNAs with EPR spectroscopy and the use of parallel and high-throughput techniques for the analysis of the structure and new functions of nucleic acids. This volume discusses how chemistry can add new frontiers to the field of nucleic acids in molecular medicine, biotechnology and nanotechnology and is not only an invaluable source of information to chemists, biochemists and life scientists but will also stimulate future research.
    Anmerkung: Description based upon print version of record , Preface; References; Contents; RNA as Major Components in Chemical Evolvable Systems; 1 Introduction: Synthetic Living Cells from an Experimental Bottom-Up Approach; 1.1 What I Cannot Create, I Do Not Understand; 1.2 Hierarchical Reduction, Metaphors, Prudent Compromises and Dogma 13; 2 First Steps: Preparations for the Real Thing; 2.1 Translate to Replicate, Rather than an RNA World; 2.2 How to Compartment RNA?; 2.3 A Hydrophobic Peptide Anchors RNA to Giant Lipidic Vesicles; 2.3.1 A Non-dynamic Model System; 2.3.2 Lipid Vesicles as Hosts; 2.3.3 Peptidyl RNA: An Informational Amphiphile , 2.3.4 Anchoring, Partitioning and (Im)Permeability2.3.5 Results; Confocal Fluorescence Microscopy on Naturally Swelled GVs; Confocal Fluorescence Microscopy on GVs Incubated with Peptidyl RNA; Light Scattering, Turbidity and Permeability Assays on LUVs; 2.3.6 Data Analysis and Discussion; 2.3.7 Quod Nulla Capra Abligurrit !; 2.4 How to Generate Plausibly Prebiotic Lipophilic ``Random´´ Peptide Libraries?; 2.4.1 Natural and Designed Cell Penetrating Peptides and Pore-Forming Proteins; 2.4.2 Potentially Functional ``Random´´ Co-oligopeptides; 3 Perspectives: Evolvable Systems Chemistry , 3.1 Lipids and Glycans3.2 Peptidyl RNA Esters; 3.3 Why RNA?; References; How the Early Genetic Code Was Established?: Inference from the Analysis of Extant Animal Mitochondrial Decoding Systems; 1 Introduction; 2 Comparison of Genetic Apparatus in Mitochondrial and Non-mitochondrial Decoding Systems; 3 Characteristics of Mitochondrial Genetic Code Systems; 4 The Codon-Anticodon Relationship in Animal Mitochondria; 5 How Was the Mitochondrial Decoding System Generated?; 6 The Early Genetic Code System; 7 From the Early Decoding System to the Universal Decoding System , 8 Concluding Remarks and PerspectiveReferences; Isomerization of RNA Phosphodiester Linkages; 1 Introduction; 2 Isomerization Under Acidic Conditions via a Neutral Oxyphosphorane Intermediate; 3 pH-Independent Isomerization via a Monoanionic Phosphorane Intermediate; 4 Isomerization via Dianionic Phosphorane: Effect of Intramolecular Hydrogen Bonding; 5 Buffer-Catalyzed Isomerization; 6 Metal Ion-Promoted Isomerization; 7 Effect of Thio Substitution and Alkylation of a Non-bridging Oxygen on Isomerization; 8 Epilogue; References , Effects of Ionic Liquid and Liposomes on the Structure, Stability, and Function of Nucleic Acids1 Introduction; 2 Nucleic Acids with and on Liposomes; 3 Nucleic Acids in a Hydrated Ionic Liquid; 4 New Sensing System for DNA Sequences; 5 Perspectives; References; Oxidative Damage on RNA Nucleobases; 1 Introduction; 2 Definition of Reactive Oxygen and Nitrogen Species and Their Properties; 3 Reactivity of ROS and RNS Versus Nucleic Acids; 4 Oxidative Lesions in RNA; 4.1 Base-Pairing Properties of Lesion Containing Duplexes; 4.2 Mutagenicity of Oxidatively Damaged Nucleobases , 4.2.1 5-Hydroxypyrimidines
    Weitere Ausg.: ISBN 9783642544514
    Weitere Ausg.: Druckausg. Chemical biology of nucleic acids Berlin : Springer, 2014 ISBN 9783642544514
    Weitere Ausg.: ISBN 3642544517
    Sprache: Englisch
    Fachgebiete: Biologie
    RVK:
    Schlagwort(e): Nucleinsäuren ; Molekularbiologie ; Molekulare Medizin ; Nucleinsäuren ; Biochemie ; Nucleinsäuren ; Klinische Medizin ; Aufsatzsammlung
    URL: Cover
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  • 3
    Online-Ressource
    Online-Ressource
    Berlin, Heidelberg : Springer-Verlag Berlin Heidelberg
    UID:
    gbv_165128766X
    Umfang: Online-Ressource (XVII, 507p. 67 illus., 45 illus. in color, digital)
    ISBN: 9783642194542
    Serie: RNA Technologies
    Inhalt: Jan Barciszewski
    Inhalt: In the most recent years, each of the RNA silencing pathways of plants have appeared to generate ncRNAs with dedicated functions, specialized biological activities and specific functional scopes. RNA silencing plays a crucial role in coordinating the expression, stability, protection and inheritance of eukaryotic genomes. It compromises several mechanisms, that invariably depend on core small non coding RNAs and that achieve dedicated sequence-specific functions. RNA silencing has been recognized to carry critical developmental, stress-response and bodyguard functions be coordinating the expre
    Anmerkung: Includes bibliographical references and index , Non Coding RNAs in Plants; Preface; Contents; Contributors; Quantification of Small Non Coding RNAs MayAllow Accurate Comparisons of MiRNAExpression Profiles from Plant Specimens; Host Small RNAs and Plant Innate Immunity; Antisense Transcription Associated with microRNA Target mRNAs; Post-Transcriptional Modifications of Plant Small RNAs; Non Coding RNAs and Gene Silencing in Grape; Genome-Wide Analysis of RNA Degradation in Arabidopsis; Small RNA Inheritance in Hybrids and Allopolyploids; Phased Small RNAs in Rice; Small RNA in Legumes; Physcomitrella patens Small RNA Pathways* , Small RNA Pathways and Their Function in the Male GametophyteRegulatory Roles of Novel Small RNAs from Pseudogenes; Polyadenylation in RNA Degradation Processes in Plants; Viroids and RNA Trafficking in Plants; Mechanisms Linking Cytosine Methylation to Histone Modification in Arabidopsis thaliana; Biogenesis of Plant MicroRNAs; MicroRNAs in Plant Roots: Current Understanding and Future Perspectives; Computational Identification of MicroRNAs and Their Targets in Wheat ( Triticum aestivum L.); MicroRNAs in Cotton; Nutrient-Responsive Plant microRNAs; MicroRNA Function in Seed Biology , Effects of Virus Infection on Transcriptional Activity of miR164a in PlantsPopulus Short RNAs; The Arabidopsis thaliana Double-Stranded RNA Binding (DRB) Domain Protein Family; Mutagenesis by Transitive RNAi; Pol IV-Dependent siRNAs in Plants; RNAi-Mediated Protection Against Citrus Tristeza Virus in Transgenic Citrus Plants; Small RNAs for Crop Improvement: Applications and Considerations for Ecological Risk Assessments; Biogenesis and Function of Virus-Derived Small Interfering RNAs in Plants; Index
    Weitere Ausg.: ISBN 9783642194535
    Weitere Ausg.: Buchausg. u.d.T. Non coding RNAs in plants Heidelberg [u.a.] : Springer, 2011 ISBN 9783642194535
    Weitere Ausg.: ISBN 3642194532
    Sprache: Englisch
    Fachgebiete: Biologie
    RVK:
    Schlagwort(e): Pflanzen ; Non-coding RNA ; Aufsatzsammlung
    URL: Volltext  (lizenzpflichtig)
    URL: Cover
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  • 4
    Online-Ressource
    Online-Ressource
    Berlin, Heidelberg : Springer Berlin Heidelberg
    UID:
    gbv_1651538832
    Umfang: Online-Ressource (IX, 654 p. 120 illus., 42 illus. in color, digital)
    ISBN: 9783642274268
    Serie: RNA Technologies
    Inhalt: Despite a half century of structural, biophysical and biochemical investigations of ribonucleic acids, they are still mysterious. RNAs stand at fertile crossroads of disciplines, integrating concepts from genomics, proteomics, dynamics as well as biochemistry and molecular biology. From 20 years it is clear, that genetic regulation of eukaryotic organisms has been misunderstood for the last years that the expression of genetic information is effected only by proteins. Basic understanding of nucleic acids has enhanced our foundation to probe novel biological functions. This is especially evident for RNA molecules whose functionality, maturation, and regulation require formation of correct secondary structure through encoded base-pairing interactions.
    Anmerkung: Description based upon print version of record , From Nucleic Acids Sequences to Molecular Medicine; Preface; Nucleic Acids Meet Human Genetic Medicine; Contents; RNAissance; 1 From So Simple a Beginning; 2 Transitions in Slow Motion; 3 RNA First; 4 From RNA to RNP World; 5 Late DNA; 6 Rays of Light in the Darkness; 7 The Avalanche; 8 Is All that Is Transcribed an RNA?; 9 Life Without RNA?; 10 RNA in Human Disease and Therapy; References; Nucleic Acids as Therapeutics; 1 Introduction; 2 DNA-Based Therapeutics; 2.1 Plasmids; 2.2 Oligonucleotides for Antisense and Antigene Applications; 2.3 Aptamers; 2.4 DNAzymes; 3 RNA-Based Therapeutics , 3.1 RNA Aptamers3.2 RNA Decoys; 3.3 Antisense RNA; 3.4 Ribozymes; 3.5 Small Interfering RNAs; 3.6 MicroRNA; 4 Gene Transfer Technologies; 4.1 Mechanical and Electrical Techniques; 4.2 Vector-Assisted Delivery Systems; 4.2.1 Viral Delivery Systems; 4.2.2 Nonviral Delivery Systems; 5 Current Status of Gene Therapy Research; 6 Recent Developments in Gene Therapy; References; Thio Effects as a Tool for Mechanistic Studies of the Cleavage of RNA Phosphodiester Bonds: The Chemical Basis; 1 Introduction , 2 The Effect of Nonbridging Thio Substitution on Metal-Ion-Independent Cleavage and Isomerization of RNA Phosphodiester Linkag...3 The Effect of Nonbridging Thio Substitution on Metal-Ion-Dependent Cleavage of RNA Phosphodiester Linkages; 4 The Effect of Thio Substitution on the Hydrolysis Ribonucleoside 2,3-Cyclic Phosphates; 5 The Effect of Bridging Thio Substitution on the Cleavage and Isomerization of RNA Phosphodiester Linkage; 6 Thio Effects on Reactions of Mono- and Triester Congeners of Ribonucleoside 3-Phosphodiesters; References , Off-Target Effects and Safety Aspects of Phosphorothioate Oligonucleotides1 Introduction; 1.1 Oligonucleotide Therapeutics; 1.2 Clinical Development; 2 Phosphorothioate Antisense Oligonucleotides; 2.1 Chemical Background; 2.2 Clinical Trials; 2.3 Pharmacokinetics and Toxicology; 3 Specificity of Phosphorothioates; 3.1 Off-Target Effects; 3.2 Molecular Mechanisms of Off-Target Effects in Vitro; 3.3 In Vivo Correlation; 4 Off-Target Effects of Other Modifications; 5 Summary; References; Oligonucleotide Conjugates: Rationale, Synthesis, and Applications; 1 Introduction , 2 Oligonucleotide Conjugates3 Syntheses of Oligonucleotide Conjugates; 3.1 Solid-Phase Conjugate Synthesis; 3.1.1 Incorporation of Promoiety During the Solid-Phase Synthesis; 3.1.2 In-Line or Stepwise Solid-Phase Conjugate Synthesis; 3.1.3 On-Support Fragment Conjugation; 3.2 Solution-Phase Conjugate Synthesis; 3.2.1 Amide and Thiourea Linkages; 3.2.2 Imine, Hydrazone, and Oxime Linkages; 3.2.3 Disulfide, Thioether, Thiazolidine, Native Ligation, and Metal-Thiol Linkages; 3.2.4 Diels-Alder [4+2] Cycloadditions; 3.2.5 Staudinger Ligation and 1,3-Dipolar Cycloadditions , 4 Oligonucleotide Conjugates in Early Development , RNAissance , Nucleic Acids as Therapeutics , Thio Effects as a Tool for Mechanistic Studies of the Cleavage of RNA Phosphodiester Bonds: The Chemical Basis , Off-Target Effects and Safety Aspects of Phosphorothioate Oligonucleotides , Oligonucleotide Conjugates: Rationale, Synthesis, and Applications , CRISPR: A Bacterial Immunity System Based on Small RNAs , Antisense Technology: From Unique Laboratory Tool to Novel Anticancer Treatments , Antisense-Mediated Reduction of Eukaryotic Noncoding RNAs , Antisense Oligonucleotides in the Treatment of Malignant Gliomas , Natural Antisense Transcripts Mediate Regulation of Gene Expression , Activation and Deactivation of Antisense and RNA Interference Function with Light , Ribozymes as Molecular Biology Reagents , RNA Technologies for Mitochondrial Genetics , RNA-Based Therapies for Inherited Metabolic Diseases , RNA-Cleaving DNA Enzymes and Their Potential Therapeutic Applications as Antibacterial and Antiviral Agents , Hammerhead Ribozymes Against Virus and Viroid RNAs , Suppression of Hepatitis C Viral Genome Replication with RNA-Cleaving Deoxyribozyme , Design of Synthetic shRNAs for Targeting Hepatitis C: A New Approach to Antiviral Therapeutics , The Diverse Active Sites in Splicing, Debranching, and MicroRNA Processing Around RNA Phosphodiester Bonds , MicroRNAs and Their Antagonists as Novel Therapeutics , microRNAs in Human Diseases and Viral Infections , Dysregulation of MicroRNA Expression and Human Diseases? , Noncoding RNAs: Identification of Cancer-Associated MicroRNAs , Targeting Non-coding RNAs for Cancer Therapy , MicroRNA Pathways in Drosophila , Viroids: The Smallest Known Infectious Agents Cause Accumulation of Viroid-Specific Small RNAs
    Weitere Ausg.: ISBN 9783642274251
    Weitere Ausg.: Buchausg. u.d.T. From nucleic acids sequences to molecular medicine Berlin : Springer, 2012 ISBN 9783642274251
    Weitere Ausg.: ISBN 3642274250
    Sprache: Englisch
    Fachgebiete: Biologie
    RVK:
    Schlagwort(e): RNS ; Molekulare Medizin ; Aufsatzsammlung
    URL: Volltext  (lizenzpflichtig)
    URL: Cover
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  • 5
    Online-Ressource
    Online-Ressource
    Berlin, Heidelberg : Springer-Verlag Berlin Heidelberg
    UID:
    gbv_635986671
    Umfang: Online-Ressource , v.: digital
    Ausgabe: Online-Ausg. Springer eBook Collection. Biomedical and Life Sciences Electronic reproduction; Available via World Wide Web
    ISBN: 9783642121685
    Serie: RNA Technologies
    Inhalt: Innovation in biotechnology that combine molecular biology, cell biology, microfabrication and bioinformatics are moving nucleic acid technologies from futuristic possibilities into common laboratory and clinical procedures. They have potential to revolutionize biomedical research and medicine. Three variants of RNA technologies are known, namely antisense oligonucleotides, RNA interference, and ribozymes. In spite of different mechanisms of action, all of them are united by the common principle: an antisense preparation works after binding with RNA-target by forming a duplex. Today all three approaches are intensively used in vivo. RNA mediated gene silencing is a powerful technology to downregulate the expression of targeted genes within the cell. Now RNA interference based therapeutics is to be released. This book provides a state-of-the-art review concerning the molecular basis as well as applications of RNA based technologies in molecular biology and medicine.
    Anmerkung: Includes bibliographical references and index , RNA Technologies and Their Applications; Preface; Contents; Contributors; The Key Features of RNA Silencing; 1 Introduction; 2 RNA Silencing Effector as a Two-Component System; 3 Small RNA Biogenesis; 3.1 miRNAs and siRNAs; 3.2 Dicer-Independent Pathways; 3.2.1 piRNAs; 3.2.2 Secondary siRNAs in Worm; 3.3 Endo-siRNAs; 4 RISC Loading, Sorting, and Target-Sensing of Small RNAs; 4.1 Sorting by Precursor Structures; 4.2 Sorting by the 5 Ends; 4.3 Sorting by Dicer Processing Polarity; 4.4 Target-Sensing; 5 Safeguards for RNA Silencing Pathways; 6 Effector Modes of RNA Silencing Pathways , 7 Regulations of RNA Silencing Pathways7.1 Processing; 7.2 Modification; 7.3 RISC Activity; 8 Perspective; References; Selected Strategies for the Delivery of siRNA In Vitro and In Vivo; 1 Introduction; 2 Mechanism of RNA Interference; 3 Naked Delivery of siRNA In Vitro; 3.1 Cellular Uptake of Naked Nucleic Acids; 3.2 The Phosphorothioate-Stimulated Cellular Delivery of siRNA; 3.3 The siRNA-Peptide Conjugate Approach; 3.4 Intracellular Release of siRNA: A Major Hurdle; 4 CPP-Mediated siRNA Delivery; 4.1 Cell-Penetrating Peptides; 4.2 Selected Examples of CPP-Mediated siRNA Delivery , 5 Selected Examples of siRNA Delivery In Vivo6 Conclusions and Future Prospects; References; RNAi Suppression and Its Application; 1 RNA Interference; 2 RNAi-Directed Viral Immunity; 3 Identification and Function Characterization of Viral RNAi Suppressors; 3.1 Agrobacterium-Mediated Transient Suppression Assay; 3.2 Reversal of Transgene-Induced Gene Silencing; 3.3 Grafting Assay; 3.4 Replication Rescue of Mutant Viruses Defective in RNAi Suppression; 4 Function Mechanism of Viral RNAi Suppressors; 4.1 Viral Suppressors that Bind Viral dsRNA to Interfere with viRNA Biogenesis , 4.2 Viral Suppressors that Target Virus-Derived siRNA for RNAi Suppression4.3 Viral Suppressors that Target RNAi Effectors for Suppression; 4.4 Viral Suppressors that Suppress Systemic RNAi; 5 RNAi Suppressors of Nonviral Origin; 5.1 Suppression of RNAi by Bacterial Pathogens; 5.2 Cellular RNAi Suppressors; 6 Biotechnological Application of RNAi Suppressors; 6.1 Enhance Gene Expression for Rapid Function Analysis and Mass Production of Valuable Protein; 6.2 Serve as Molecular Tools to Probe Various RNAi-Directed Functions; Appendix; References , Strategies to Prevent siRNA-Triggered Cellular Toxicity1 Introduction; 2 Cellular Sensors of siRNA-Triggered Innate Immune Response; 2.1 TLR-Mediated Innate Immunity; 2.2 Non-TLR-Mediated Innate Immunity; 3 Cellular Sequels After siRNA-Triggered Innate Immune System Activation; 4 Overcoming Synthetic siRNA-Triggered Innate Immune Response; 5 Overcoming shRNA-Triggered Innate Immune Response; 6 shRNA-Mediated Disruption of the Endogenous miRNA Machinery; 7 Conclusions; References; RNAi in Malignant Brain Tumors: Relevance to Molecular and Translational Research; 1 Introduction , 1.1 Diagnostic Characteristics of Diffuse Astrocytic Tumor , Electronic reproduction; Available via World Wide Web
    Weitere Ausg.: ISBN 9783642121678
    Weitere Ausg.: Buchausg. u.d.T. RNA technologies and their applications Berlin : Springer, 2010 ISBN 9783642121678
    Sprache: Englisch
    Fachgebiete: Biologie
    RVK:
    Schlagwort(e): RNS ; Molekulare Medizin ; Aufsatzsammlung
    URL: Volltext  (lizenzpflichtig)
    URL: Cover
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  • 6
    Online-Ressource
    Online-Ressource
    Berlin, Heidelberg : Springer Berlin Heidelberg
    UID:
    gbv_1647266831
    Umfang: Online-Ressource (digital)
    ISBN: 9783540787099
    Serie: SpringerLink
    Weitere Ausg.: ISBN 9783540787082
    Weitere Ausg.: Buchausg. u.d.T. RNA Technologies in Cardiovascular Medicine and Research Berlin : Springer, 2008 ISBN 9783540787082
    Weitere Ausg.: ISBN 3540787089
    Sprache: Englisch
    Fachgebiete: Biologie , Medizin
    RVK:
    RVK:
    Schlagwort(e): Kardiovaskuläre Krankheit ; Molekulare Medizin ; RNS ; Aufsatzsammlung
    URL: Volltext  (lizenzpflichtig)
    URL: Cover
    Mehr zum Autor: Poller, Wolfgang
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