In:
Cancer Research, American Association for Cancer Research (AACR), Vol. 70, No. 8_Supplement ( 2010-04-15), p. 3086-3086
Abstract:
Introduction: Colorectal adenomas are common precursors of colorectal cancer (CRC). About only 5% of adenomas progress to cancer and this progression is mostly associated with overall onset/increase of chromosomal instability. Gain of 13q is often implicated in this progression of adenoma to carcinoma (1). Until recently however no genes were identified to be the drivers of this amplicon. Recently, Firestein and collaborators (2) showed that cyclin 8 (CDK8), at 13q12.13, functions as an oncogene in CRC. The aim of this study was to evaluate CDK8 gene dosage effects in colorectal adenoma to carcinoma progression. Material and methods: Sixty seven colorectal tumours (34 adenomas and 28 carcinomas) were analysed by array CGH (5k BAC platform, including contig coverage of 13q) and by expression microarray (30k Compugen library). Integration of DNA copy number dosage and gene expression was performed using the Ace-it tool (3). Results: In the tumours analysed we observed 13q copy number gain in 9% and 46% of adenomas and carcinomas, respectively. Integrating copy number and mRNA expression with the differential upregulation of genes between carcinomas and adenomas, provided us with a list of 43 genes. Within this list, CDK8 ranked 7th in significancy (p=0.003). Conclusions: Copy number gain of 13q has a gene dosage effect on CDK8 mRNA expression, indicating a role of this gene in colorectal adenoma to carcinoma progression. (1) Hermsen M, Postma C, Baak J, Weiss M, Rapallo A, Sciutto A, Roemen G, Arends JW, Williams R, Giaretti W, De Goeij A, Meijer G. Colorectal adenoma to carcinoma progression follows multiple pathways of chromosomal instability. Gastroenterology 2002 Oct;123(4):1109-19. (2) Firestein R, Bass AJ, Kim SY, Dunn IF, Silver SJ, Guney I, Freed E, Ligon AH, Vena N, Ogino S, Chheda MG, Tamayo P, Finn S, Shrestha Y, Boehm JS, Jain S, Bojarski E, Mermel C, Barretina J, Chan JA, Baselga J, Tabernero J, Root DE, Fuchs CS, Loda M, Shivdasani RA, Meyerson M, Hahn WC. CDK8 is a colorectal cancer oncogene that regulates beta-catenin activity. Nature 2008 Sep 25;455(7212):547-51. (3) van Wieringen WN, Belien JA, Vosse SJ, Achame EM, Ylstra B. ACE-it: a tool for genome-wide integration of gene dosage and RNA expression data. Bioinformatics. 2006 Aug 1;22(15):1919-20. Note: This abstract was not presented at the AACR 101st Annual Meeting 2010 because the presenter was unable to attend. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 101st Annual Meeting of the American Association for Cancer Research; 2010 Apr 17-21; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2010;70(8 Suppl):Abstract nr 3086.
Type of Medium:
Online Resource
ISSN:
0008-5472
,
1538-7445
DOI:
10.1158/1538-7445.AM10-3086
Language:
English
Publisher:
American Association for Cancer Research (AACR)
Publication Date:
2010
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2036785-5
detail.hit.zdb_id:
1432-1
detail.hit.zdb_id:
410466-3
