In:
PLOS ONE, Public Library of Science (PLoS), Vol. 15, No. 11 ( 2020-11-20), p. e0242060-
Abstract:
High-throughput 16S rRNA sequencing was performed to compare the microbiomes inhabiting two contrasting soil types—sod-podzolic soil and chernozem—and the corresponding culturome communities of potentially cellulolytic bacteria cultured on standard Hutchinson media. For each soil type, soil-specific microorganisms have been identified: for sod-podzolic soil— Acidothermus , Devosia , Phenylobacterium and Tumebacillus , and for chernozem soil— Sphingomonas , Bacillus and Blastococcus . The dynamics of differences between soil types for bulk soil samples and culturomes varied depending on the taxonomic level of the corresponding phylotypes. At high taxonomic levels, the number of common taxa between soil types increased more slowly for bulk soil than for culturome. Differences between soil-specific phylotypes were detected in bulk soil at a low taxonomic level (genus, species). A total of 13 phylotypes were represented both in soil and in culturome. No relationship was shown between the abundance of these phylotypes in soil and culturome.
Type of Medium:
Online Resource
ISSN:
1932-6203
DOI:
10.1371/journal.pone.0242060
DOI:
10.1371/journal.pone.0242060.g001
DOI:
10.1371/journal.pone.0242060.g002
DOI:
10.1371/journal.pone.0242060.g003
DOI:
10.1371/journal.pone.0242060.g004
DOI:
10.1371/journal.pone.0242060.t001
DOI:
10.1371/journal.pone.0242060.s001
DOI:
10.1371/journal.pone.0242060.s002
DOI:
10.1371/journal.pone.0242060.s003
DOI:
10.1371/journal.pone.0242060.s004
DOI:
10.1371/journal.pone.0242060.r001
DOI:
10.1371/journal.pone.0242060.r002
DOI:
10.1371/journal.pone.0242060.r003
DOI:
10.1371/journal.pone.0242060.r004
DOI:
10.1371/journal.pone.0242060.r005
DOI:
10.1371/journal.pone.0242060.r006
Language:
English
Publisher:
Public Library of Science (PLoS)
Publication Date:
2020
detail.hit.zdb_id:
2267670-3
