In:
Frontiers in Plant Science, Frontiers Media SA, Vol. 15 ( 2024-7-19)
Abstract:
Saccharum complex includes genera Saccharum , Miscanthus , Erianthus , Narenga , and Tripidium . Since the Saccharum complex/Saccharinae constitutes the gene pool used by sugarcane breeders to introduce useful traits into sugarcane, studying the genomic characterization of the Saccharum complex has become particularly important. Here, we assembled graph-based mitochondrial genomes (mitogenomes) of four Saccharinae species ( T. arundinaceum , E. rockii, M. sinensis , and N. porphyrocoma ) using Illumina and PacBio sequencing data. The total lengths of the mitogenomes of T. arundinaceum , M. sinensis , E. rockii and N. porphyrocoma were 549,593 bp, 514,248 bp, 481,576 bp and 513,095 bp, respectively. Then, we performed a comparative mitogenomes analysis of Saccharinae species, including characterization, organelles transfer sequence, collinear sequence, phylogenetics analysis, and gene duplicated/loss. Our results provided the mitogenomes of four species closely related to sugarcane breeding, enriching the mitochondrial genomic resources of the Saccharinae. Additionally, our study offered new insights into the evolution of mitogenomes at the family and genus levels and enhanced our understanding of organelle evolution in the highly polyploid Saccharum genus.
Type of Medium:
Online Resource
ISSN:
1664-462X
DOI:
10.3389/fpls.2024.1421170
DOI:
10.3389/fpls.2024.1421170.s001
DOI:
10.3389/fpls.2024.1421170.s002
Language:
Unknown
Publisher:
Frontiers Media SA
Publication Date:
2024
detail.hit.zdb_id:
2687947-5
detail.hit.zdb_id:
2613694-6
