Format:
1 Online-Ressource
Content:
Abstract: Summary〈br〉〈br〉Many aspects of the global response to the COVID-19 pandemic are enabled by the fast and open publication of SARS-CoV-2 genetic sequence data. The European Nucleotide Archive (ENA) is the European recommended open repository for genetic sequences. In this work, we present a tool for submitting raw sequencing reads of SARS-CoV-2 to ENA. The tool features a single-step submission process, a graphical user interface, tabular-formatted metadata and the possibility to remove human reads prior to submission. A Galaxy wrap of the tool allows users with little or no bioinformatics knowledge to do bulk sequencing read submissions. The tool is also packed in a Docker container to ease deployment
Note:
Bioinformatics. - 37, 21 (2021) , 3983-3985, ISSN: 1367-4803
Language:
English
DOI:
10.1093/bioinformatics/btab421
URN:
urn:nbn:de:bsz:25-freidok-2478377
URL:
https://doi.org/10.1093/bioinformatics/btab421
URL:
https://nbn-resolving.org/urn:nbn:de:bsz:25-freidok-2478377